RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 EME2A4GXA9 379 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 LRRIQ3A6PVS8 624 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 ZBTB7BO15156 539 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 CYP11B2P19099 503 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 ALDH3A1P30838 453 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 ZNF165P49910 485 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 RHBDL3P58872 404 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 TUBA4AP68366 448 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 ZBED6P86452 979 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 HDLBPQ00341 1268 aaKnown RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 LRMPQ12912 555 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 BLMHQ13867 455 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 CNGA3Q16281 694 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 MSMPQ1L6U9 139 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 PLEKHO1Q53GL0 409 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 CMPK2Q5EBM0 449 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 CCDC70Q6NSX1 233 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 WDR93Q6P2C0 686 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 RBM43Q6ZSC3 357 aaKnown RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 CCDC121Q6ZUS5 278 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 SRGAP1Q7Z6B7 1085 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 PHC3Q8NDX5 983 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 TEKT4Q8WW24 435 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 COL26A1Q96A83 441 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 ZNF653Q96CK0 615 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 OPTNQ96CV9 577 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 IL17RAQ96F46 866 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 DHRS1Q96LJ7 313 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 CCDC28BQ9BUN5 200 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 C2orf49Q9BVC5 232 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 CARD6Q9BX69 1037 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 USP26Q9BXU7 913 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 EIF2AQ9BY44 585 aaKnown RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 FAM192AQ9GZU8 254 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 SCAND2PQ9GZW5 306 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 NACA2Q9H009 215 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 MIS12Q9H081 205 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 BRD8Q9H0E9 1235 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 IRF2BPLQ9H1B7 796 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 TNMDQ9H2S6 317 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 CBX8Q9HC52 389 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 GDPD2Q9HCC8 539 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 CD248Q9HCU0 757 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 TLR7Q9NYK1 1049 aaKnown RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 MIS18AQ9NYP9 233 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 TFIP11Q9UBB9 837 aaKnown RBP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB4-202ENST00000458277 TTC21BQ7Z4L5 1316 aa6.23□□□□□ -1.41
HMGB4-202ENST00000458277 MYOM2P54296 1465 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 CLTCL1P53675 1640 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 ARAP3Q8WWN8 1544 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 CFAP73A6NFT4 308 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 E7ENQ6 273 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 H3BQF6 201 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 NDUFAB1O14561 156 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 CYTH3O43739 400 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 ZNF189O75820 626 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 FLOT1O75955 427 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 SEC31AO94979 1220 aaKnown RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 EIF2S1P05198 315 aaKnown RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 PARP1P09874 1014 aaKnown RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 ZSCAN22P10073 491 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 GHRP10912 638 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 SYT1P21579 422 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 SMARCA1P28370 1054 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 SOX11P35716 441 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 CCZ1BP86790 482 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 CCZ1P86791 482 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 EIF2B5Q13144 721 aaKnown RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 SNX1Q13596 522 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 CASP8Q14790 479 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 PKN1Q16512 942 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 DUOXA2Q1HG44 320 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 WASHC4Q2M389 1173 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 SGSM1Q2NKQ1 1148 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 ZNF394Q53GI3 561 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 PARP10Q53GL7 1025 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 CYB5D1Q6P9G0 228 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 ZNF365Q70YC5 407 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 BZW1Q7L1Q6 419 aaKnown RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 VSIG10LQ86VR7 867 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 TRIM50Q86XT4 487 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 ELOA2Q8IYF1 753 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 FBXL6Q8N531 539 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 MIGA1Q8NAN2 632 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 ZBTB8BQ8NAP8 495 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 SMC1BQ8NDV3 1235 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 ACSBG1Q96GR2 724 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 MUC3BQ9H195 1237 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 DMAP1Q9NPF5 467 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 HDAC6Q9UBN7 1215 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 CROTQ9UKG9 612 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-202ENST00000458277 SLC4A7Q9Y6M7 1214 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 PLCH2O75038 1416 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 SHANK2Q9UPX8 1470 aa6.22□□□□□ -1.41
HMGB4-202ENST00000458277 ABCA9Q8IUA7 1624 aa6.21□□□□□ -1.41
HMGB4-202ENST00000458277 TMEM221A6NGB7 291 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 A6NHS1 94 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 WDR46O15213 610 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms