RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 TCHHQ07283 1943 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 GPR75-ASB3A0A0A6YYF3 556 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 GOLGA6L4A6NEF3 574 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 CLASP2O75122 1294 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 ZNF189O75820 626 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 SASH3O75995 380 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 DPEP1P16444 411 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 TCF7P36402 384 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 MAGEA10P43363 369 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 BTG3Q14201 252 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 SNCBQ16143 134 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 SBK1Q52WX2 424 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 MFSD14BQ5SR56 506 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 FBXW10Q5XX13 1052 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 Q6ZUG5 572 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 SLF2Q8IX21 1173 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 LMNTD2Q8IXW0 634 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 NCOA7Q8NI08 942 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 LRRC45Q96CN5 670 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 GBP3Q9H0R5 595 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 MRPL46Q9H2W6 279 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 EBF2Q9HAK2 575 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 ATP8A2Q9NTI2 1148 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 RABL2AQ9UBK7 228 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 JAG2Q9Y219 1238 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 DAAM1Q9Y4D1 1078 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 N6AMT1Q9Y5N5 214 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 TACC3Q9Y6A5 838 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 COL4A5P29400 1685 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 NEDD4P46934 1319 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 MYH8P13535 1937 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 TBKBP1A7MCY6 615 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 RIMBP2O15034 1052 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 BIRC5O15392 142 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 ZBTB7AO95365 584 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 LDHCP07864 332 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 PCP11498 1178 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 CD44P16070 742 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 SMARCA1P28370 1054 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 ATICP31939 592 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 GBP2P32456 591 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 LIG3P49916 1009 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 CSE1LP55060 971 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 INHBCP55103 352 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 SUZ12Q15022 739 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 EMC10Q5UCC4 262 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 IQCEQ6IPM2 695 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 CERS5Q8N5B7 392 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 KRI1Q8N9T8 703 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 ZBTB8BQ8NAP8 495 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 SUPT20HQ8NEM7 779 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 NKX2-3Q8TAU0 364 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 SDR42E1Q8WUS8 393 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 TCEANC2Q96MN5 208 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 CRNKL1Q9BZJ0 848 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 VPS33BQ9H267 617 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 VCX3BQ9H321 246 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 RPAP3Q9H6T3 665 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 CNNM2Q9H8M5 875 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 ACTR5Q9H9F9 607 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 ZCCHC17Q9NP64 241 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 DCP1AQ9NPI6 582 aaPredicted RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 AATFQ9NY61 560 aaKnown RBP eCLIP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 DDX20Q9UHI6 824 aaKnown RBP7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 DNAI1Q9UI46 699 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 IKBKGQ9Y6K9 419 aa7.56□□□□□ -1.2
CUBNP3-201ENST00000457461 NID2Q14112 1375 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 MYH15Q9Y2K3 1946 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 ZSCAN12O43309 604 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 ATP9BO43861 1147 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 PFKFB2O60825 505 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 TMCC1O94876 653 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 NPTXRO95502 500 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 NAT2P11245 290 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 PTGER2P43116 358 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 AARSP49588 968 aaKnown RBP eCLIP7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 NT5C2P49902 561 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 GTF2IP78347 998 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 PPARAQ07869 468 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 USP4Q13107 963 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 TUBB2AQ13885 445 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 R3HDM1Q15032 1099 aaKnown RBP7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 ARHGEF6Q15052 776 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 DIXDC1Q155Q3 683 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 SEPT7Q16181 437 aaKnown RBP7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 SPDYCQ5MJ68 293 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 SH2D4BQ5SQS7 431 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 CCDC122Q5T0U0 273 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 STRIP1Q5VSL9 837 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 TMEM110Q86TL2 294 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 PLA2G4DQ86XP0 818 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 RTKN2Q8IZC4 609 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 TRIM11Q96F44 468 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 ZNF274Q96GC6 653 aaPredicted RBP7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 PHF12Q96QT6 1004 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 SPAG5Q96R06 1193 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 TSC22D3Q99576 134 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 TUBB2BQ9BVA1 445 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 MRIQ9BWK5 157 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 ATXN10Q9UBB4 475 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms