RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 PIBF1Q8WXW3 757 aa14.34□□□□□ -0.11
VEGFA-210ENST00000457104 VWCEQ96DN2 955 aa14.34□□□□□ -0.11
VEGFA-210ENST00000457104 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
VEGFA-210ENST00000457104 HIPK3Q9H422 1215 aa14.34□□□□□ -0.11
VEGFA-210ENST00000457104 TRMT13Q9NUP7 481 aaKnown RBP14.34□□□□□ -0.11
VEGFA-210ENST00000457104 UNC80Q8N2C7 3258 aa14.33□□□□□ -0.11
VEGFA-210ENST00000457104 CHD7Q9P2D1 2997 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 GCOM1H8Y6P7 765 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-210ENST00000457104 PLEKHA8P1O95397 391 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 GH1P01241 217 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 MMP3P08254 477 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 POLR2MP0CAP2 368 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 ACRP10323 421 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 RXRAP19793 462 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 KIF5BP33176 963 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 SRBD1Q8N5C6 995 aaKnown RBP14.33□□□□□ -0.12
VEGFA-210ENST00000457104 CTCFLQ8NI51 663 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-210ENST00000457104 GUCD1Q96NT3 240 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 LRRC2Q9BYS8 371 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 IL23AQ9NPF7 189 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 STXBP5LQ9Y2K9 1186 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 TET1Q8NFU7 2136 aa14.33□□□□□ -0.12
VEGFA-210ENST00000457104 CCDC69A6NI79 296 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 CDC45O75419 566 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 CYP2C9P11712 490 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 MYCLP12524 364 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-210ENST00000457104 EXOSC10Q01780 885 aaKnown RBP14.32□□□□□ -0.12
VEGFA-210ENST00000457104 TSGA10IPQ3SY00 556 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 NFRKBQ6P4R8 1299 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 NFXL1Q6ZNB6 911 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 ZNF365Q70YC5 407 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 SGMS1Q86VZ5 419 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 CMTR1Q8N1G2 835 aaKnown RBP14.32□□□□□ -0.12
VEGFA-210ENST00000457104 KAT2BQ92831 832 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-210ENST00000457104 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-210ENST00000457104 FAM161BQ96MY7 647 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 TTYH1Q9H313 450 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-210ENST00000457104 FRMPD4Q14CM0 1322 aa14.32□□□□□ -0.12
VEGFA-210ENST00000457104 CCL23P55773 120 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 MRPS9P82933 396 aaKnown RBP14.31□□□□□ -0.12
VEGFA-210ENST00000457104 SP2Q02086 613 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 ADCK5Q3MIX3 580 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 ZNF697Q5TEC3 545 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 RAB11FIP4Q86YS3 637 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 GPKOWQ92917 476 aaPredicted RBP eCLIP14.31□□□□□ -0.129e-7■□□□□ 11
VEGFA-210ENST00000457104 RRP36Q96EU6 259 aaKnown RBP14.31□□□□□ -0.12
VEGFA-210ENST00000457104 CCDC136Q96JN2 1154 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 NEK1Q96PY6 1258 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 LZTS2Q9BRK4 669 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 SEMA6BQ9H3T3 888 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
VEGFA-210ENST00000457104 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-210ENST00000457104 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-210ENST00000457104 MEIS2O14770 477 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 SUPT20HL2P0C7V6 817 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 CALM1P0DP23 149 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 CALM2P0DP24 149 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 CALM3P0DP25 149 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 HOXD8P13378 290 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-210ENST00000457104 GNAQP50148 359 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 PTPN11Q06124 597 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-210ENST00000457104 LAMC2Q13753 1193 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 FAM47CQ5HY64 1035 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 RNF20Q5VTR2 975 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 PSRC1Q6PGN9 363 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-210ENST00000457104 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 FANCBQ8NB91 859 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 HERVK_113Q902F9 699 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 SCLYQ96I15 445 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 CTAGE1Q96RT6 745 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 CXXC1Q9P0U4 656 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-210ENST00000457104 SLC12A7Q9Y666 1083 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 REV3LO60673 3130 aa14.3□□□□□ -0.12
VEGFA-210ENST00000457104 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 MYO9BQ13459 2157 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 GRXCR1A8MXD5 290 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 PIK3CDO00329 1044 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 FGBP02675 491 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 TGFB3P10600 412 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 CASTP20810 708 aaKnown RBP14.29□□□□□ -0.12
VEGFA-210ENST00000457104 CCND2P30279 289 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 DGKDQ16760 1214 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 CELF3Q5SZQ8 465 aaKnown RBP14.29□□□□□ -0.12
VEGFA-210ENST00000457104 KCNV1Q6PIU1 500 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 DHX37Q8IY37 1157 aaKnown RBP14.29□□□□□ -0.12
VEGFA-210ENST00000457104 PPTC7Q8NI37 304 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 TCEANC2Q96MN5 208 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
VEGFA-210ENST00000457104 hCG_1642624A0A1W2PR95 340 aa14.28□□□□□ -0.12
VEGFA-210ENST00000457104 HAS3O00219 553 aa14.28□□□□□ -0.12
VEGFA-210ENST00000457104 TRANK1O15050 2925 aa14.28□□□□□ -0.12
VEGFA-210ENST00000457104 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
VEGFA-210ENST00000457104 DNAJB2P25686 324 aa14.28□□□□□ -0.12
VEGFA-210ENST00000457104 HSDL1Q3SXM5 330 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms