RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SH2B1Q9NRF2 756 aaPredicted RBP11.56□□□□□ -0.56
ATG4A-206ENST00000457035 CNPY2Q9Y2B0 182 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 FRMPD3Q5JV73 1810 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 ESYT2A0FGR8 921 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 ADAMTS3O15072 1205 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 SEPT4O43236 478 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 NR3C2P08235 984 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 GJA8P48165 433 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
ATG4A-206ENST00000457035 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
ATG4A-206ENST00000457035 ARHGEF16Q5VV41 709 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 TAPT1Q6NXT6 567 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 VSIG10LQ86VR7 867 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 SMARCC2Q8TAQ2 1214 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 CUL5Q93034 780 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 AIFM3Q96NN9 605 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 DEFB118Q96PH6 123 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 PDCD2LQ9BRP1 358 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 CRISPLD2Q9H0B8 497 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 SH3GLB2Q9NR46 395 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 VPS54Q9P1Q0 977 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 STK36Q9NRP7 1315 aa11.55□□□□□ -0.56
ATG4A-206ENST00000457035 ALPK3Q96L96 1907 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 RBM47A0AV96 593 aaKnown RBP11.54□□□□□ -0.56
ATG4A-206ENST00000457035 B4DLN1 442 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 STK25O00506 426 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 JAK2O60674 1132 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 EIF2AK2P19525 551 aaKnown RBP11.54□□□□□ -0.56
ATG4A-206ENST00000457035 CNGA1P29973 690 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 MCM2P49736 904 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 ADCY7P51828 1080 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 PGM5Q15124 567 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 UBE2SQ16763 222 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 CCDC144BQ3MJ40 725 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 EEPD1Q7L9B9 569 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 CCDC83Q8IWF9 413 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 U2AF1L4Q8WU68 220 aaKnown RBP11.54□□□□□ -0.56
ATG4A-206ENST00000457035 TMX3Q96JJ7 454 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 LLPHQ9BRT6 129 aaKnown RBP11.54□□□□□ -0.56
ATG4A-206ENST00000457035 GLT8D2Q9H1C3 349 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 VTA1Q9NP79 307 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 PDGFCQ9NRA1 345 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 ORC3Q9UBD5 711 aaPredicted RBP11.54□□□□□ -0.56
ATG4A-206ENST00000457035 DDX20Q9UHI6 824 aaKnown RBP11.54□□□□□ -0.56
ATG4A-206ENST00000457035 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 LRRC37A2A6NM11 1700 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 FRMPD4Q14CM0 1322 aa11.54□□□□□ -0.56
ATG4A-206ENST00000457035 ADCY6O43306 1168 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 MSCO60682 206 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 EIF3JO75822 258 aaKnown RBP11.53□□□□□ -0.56
ATG4A-206ENST00000457035 RGS20O76081 388 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 GNA11P29992 359 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 PDE4DQ08499 809 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 NPY5RQ15761 445 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 STXBP2Q15833 593 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 TMEM63BQ5T3F8 832 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 IQSEC1Q6DN90 963 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 FBXO16Q8IX29 292 aaPredicted RBP11.53□□□□□ -0.56
ATG4A-206ENST00000457035 FAM177A1Q8N128 213 aaPredicted RBP11.53□□□□□ -0.56
ATG4A-206ENST00000457035 IL31RAQ8NI17 732 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 CCDC12Q8WUD4 166 aaPredicted RBP11.53□□□□□ -0.56
ATG4A-206ENST00000457035 MPHOSPH6Q99547 160 aaKnown RBP11.53□□□□□ -0.56
ATG4A-206ENST00000457035 C6orf50Q9HD87 102 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
ATG4A-206ENST00000457035 OGDHLQ9ULD0 1010 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 FAM184BQ9ULE4 1060 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 PCDHA6Q9UN73 950 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 PCDHA8Q9Y5H6 950 aa11.53□□□□□ -0.56
ATG4A-206ENST00000457035 DNAH12Q6ZR08 3092 aa11.52□□□□□ -0.56
ATG4A-206ENST00000457035 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.52□□□□□ -0.57
ATG4A-206ENST00000457035 H0YGN5 161 aa11.52□□□□□ -0.57
ATG4A-206ENST00000457035 FOSP01100 380 aaPredicted RBP11.52□□□□□ -0.57
ATG4A-206ENST00000457035 TFRCP02786 760 aaKnown RBP11.52□□□□□ -0.57
ATG4A-206ENST00000457035 MYCLP12524 364 aaPredicted RBP11.52□□□□□ -0.57
ATG4A-206ENST00000457035 AKR1A1P14550 325 aa11.52□□□□□ -0.57
ATG4A-206ENST00000457035 CAPN2P17655 700 aa11.52□□□□□ -0.57
ATG4A-206ENST00000457035 ADCYAP1R1P41586 468 aa11.52□□□□□ -0.57
ATG4A-206ENST00000457035 MRPS9P82933 396 aaKnown RBP11.52□□□□□ -0.57
ATG4A-206ENST00000457035 ANO1Q5XXA6 986 aa11.52□□□□□ -0.57
ATG4A-206ENST00000457035 CCDC148Q8NFR7 591 aa11.52□□□□□ -0.57
ATG4A-206ENST00000457035 DPF3Q92784 378 aa11.52□□□□□ -0.57
ATG4A-206ENST00000457035 GJB4Q9NTQ9 266 aa11.52□□□□□ -0.57
ATG4A-206ENST00000457035 TMEM260Q9NX78 707 aa11.52□□□□□ -0.57
ATG4A-206ENST00000457035 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.57
ATG4A-206ENST00000457035 GNEQ9Y223 722 aaKnown RBP11.52□□□□□ -0.57
ATG4A-206ENST00000457035 DOCK5Q9H7D0 1870 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 SPDYE3A6NKU9 549 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 M0R2N6 131 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 DUSP11O75319 330 aaKnown RBP11.51□□□□□ -0.57
ATG4A-206ENST00000457035 SMPD1P17405 629 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 NLRP5P59047 1200 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 TNFAIP2Q03169 654 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 AP3B2Q13367 1082 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 DUSP28Q4G0W2 176 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 JAKMIP3Q5VZ66 844 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 GALNT17Q6IS24 598 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 XRRA1Q6P2D8 792 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 CCDC62Q6P9F0 684 aa11.51□□□□□ -0.57
ATG4A-206ENST00000457035 BICD2Q8TD16 824 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms