RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 GOLGA8AA7E2F4 631 aa18.71■□□□□ 0.59
CPSF6-203ENST00000456847 GOLGA8BA8MQT2 603 aa18.71■□□□□ 0.59
CPSF6-203ENST00000456847 CPA1P15085 419 aa18.71■□□□□ 0.59
CPSF6-203ENST00000456847 PURAQ00577 322 aaKnown RBP18.71■□□□□ 0.59
CPSF6-203ENST00000456847 CCDC62Q6P9F0 684 aa18.71■□□□□ 0.59
CPSF6-203ENST00000456847 IL31RAQ8NI17 732 aa18.71■□□□□ 0.59
CPSF6-203ENST00000456847 LRCH3Q96II8 777 aa18.71■□□□□ 0.59
CPSF6-203ENST00000456847 SEZ6LQ9BYH1 1024 aa18.71■□□□□ 0.59
CPSF6-203ENST00000456847 ITGB8P26012 769 aa18.7■□□□□ 0.58
CPSF6-203ENST00000456847 KCNB2Q92953 911 aa18.7■□□□□ 0.58
CPSF6-203ENST00000456847 TBX21Q9UL17 535 aa18.7■□□□□ 0.58
CPSF6-203ENST00000456847 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
CPSF6-203ENST00000456847 KPNA6O60684 536 aa18.7■□□□□ 0.58
CPSF6-203ENST00000456847 FPGSQ05932 587 aa18.7■□□□□ 0.58
CPSF6-203ENST00000456847 HEATR3Q7Z4Q2 680 aa18.7■□□□□ 0.58
CPSF6-203ENST00000456847 SLC43A3Q8NBI5 491 aa18.7■□□□□ 0.58
CPSF6-203ENST00000456847 PPP1R12CQ9BZL4 782 aa18.7■□□□□ 0.58
CPSF6-203ENST00000456847 GRIN2DO15399 1336 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 CNTNAP5Q8WYK1 1306 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 A6NJR5 290 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 TIMP1P01033 207 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 CHMP4BP1P59074 171 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 ARHGAP1Q07960 439 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 LRIT3Q3SXY7 679 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 FAM47CQ5HY64 1035 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 Q6ZUG5 572 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 AFG1LQ8WV93 481 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 ZFP91Q96JP5 570 aaPredicted RBP18.69■□□□□ 0.58
CPSF6-203ENST00000456847 SCN10AQ9Y5Y9 1956 aa18.69■□□□□ 0.58
CPSF6-203ENST00000456847 MMP3P08254 477 aa18.68■□□□□ 0.58
CPSF6-203ENST00000456847 USP17L6PQ6QN14 398 aa18.68■□□□□ 0.58
CPSF6-203ENST00000456847 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
CPSF6-203ENST00000456847 DDX41Q9UJV9 622 aaKnown RBP18.68■□□□□ 0.58
CPSF6-203ENST00000456847 CD4P01730 458 aa18.68■□□□□ 0.58
CPSF6-203ENST00000456847 CASTP20810 708 aaKnown RBP18.68■□□□□ 0.58
CPSF6-203ENST00000456847 PSMA5P28066 241 aa18.68■□□□□ 0.58
CPSF6-203ENST00000456847 KCNV1Q6PIU1 500 aa18.68■□□□□ 0.58
CPSF6-203ENST00000456847 DHX37Q8IY37 1157 aaKnown RBP18.68■□□□□ 0.58
CPSF6-203ENST00000456847 GPKOWQ92917 476 aaPredicted RBP eCLIP18.68■□□□□ 0.584e-7■■□□□ 14.1
CPSF6-203ENST00000456847 SORBS3O60504 671 aa18.67■□□□□ 0.58
CPSF6-203ENST00000456847 B4GALT4O60513 344 aa18.67■□□□□ 0.58
CPSF6-203ENST00000456847 APOBRQ0VD83 1088 aa18.67■□□□□ 0.58
CPSF6-203ENST00000456847 SHHQ15465 462 aa18.67■□□□□ 0.58
CPSF6-203ENST00000456847 C9orf50Q5SZB4 431 aa18.67■□□□□ 0.58
CPSF6-203ENST00000456847 BRF1Q92994 677 aa18.67■□□□□ 0.58
CPSF6-203ENST00000456847 TRPV6Q9H1D0 765 aa18.67■□□□□ 0.58
CPSF6-203ENST00000456847 PSTPIP2Q9H939 334 aa18.67■□□□□ 0.58
CPSF6-203ENST00000456847 FRMPD4Q14CM0 1322 aa18.67■□□□□ 0.58
CPSF6-203ENST00000456847 RPS6KB1P23443 525 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 METAP2P50579 478 aaKnown RBP eCLIP18.66■□□□□ 0.58
CPSF6-203ENST00000456847 LAMC2Q13753 1193 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 GNPTABQ3T906 1256 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 ALDH8A1Q9H2A2 487 aaPredicted RBP18.66■□□□□ 0.58
CPSF6-203ENST00000456847 PIK3CDO00329 1044 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 EPB41L2O43491 1005 aaKnown RBP18.66■□□□□ 0.58
CPSF6-203ENST00000456847 RGS20O76081 388 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 RCAN1P53805 252 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 NBPF20Q3BBV1 942 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 MFSD5Q6N075 450 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 TMEM199Q8N511 208 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 PPP1R13LQ8WUF5 828 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 HIPK3Q9H422 1215 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 DOCK5Q9H7D0 1870 aa18.66■□□□□ 0.58
CPSF6-203ENST00000456847 MEIS2O14770 477 aa18.65■□□□□ 0.58
CPSF6-203ENST00000456847 STAM2O75886 525 aa18.65■□□□□ 0.58
CPSF6-203ENST00000456847 GGPS1O95749 300 aa18.65■□□□□ 0.58
CPSF6-203ENST00000456847 NAPAP54920 295 aa18.65■□□□□ 0.58
CPSF6-203ENST00000456847 PPIGQ13427 754 aaKnown RBP eCLIP18.65■□□□□ 0.587e-10■□□□□ 9.9
CPSF6-203ENST00000456847 DGKDQ16760 1214 aa18.65■□□□□ 0.58
CPSF6-203ENST00000456847 UBE2SQ16763 222 aa18.65■□□□□ 0.58
CPSF6-203ENST00000456847 SPDYE3A6NKU9 549 aa18.64■□□□□ 0.58
CPSF6-203ENST00000456847 UBA1P22314 1058 aaKnown RBP18.64■□□□□ 0.58
CPSF6-203ENST00000456847 CDC27P30260 824 aa18.64■□□□□ 0.58
CPSF6-203ENST00000456847 CYP2C18P33260 490 aa18.64■□□□□ 0.58
CPSF6-203ENST00000456847 EPHB4P54760 987 aa18.64■□□□□ 0.58
CPSF6-203ENST00000456847 WWC2Q6AWC2 1192 aa18.64■□□□□ 0.58
CPSF6-203ENST00000456847 EMID1Q96A84 441 aaPredicted RBP18.64■□□□□ 0.58
CPSF6-203ENST00000456847 RNPC3Q96LT9 517 aaKnown RBP18.64■□□□□ 0.58
CPSF6-203ENST00000456847 TRMT13Q9NUP7 481 aaKnown RBP18.64■□□□□ 0.58
CPSF6-203ENST00000456847 RTEL1Q9NZ71 1219 aa18.64■□□□□ 0.58
CPSF6-203ENST00000456847 CCDC196A0A1B0GTZ2 297 aa18.64■□□□□ 0.57
CPSF6-203ENST00000456847 SUPT20HL2P0C7V6 817 aa18.64■□□□□ 0.57
CPSF6-203ENST00000456847 MRPS9P82933 396 aaKnown RBP18.64■□□□□ 0.57
CPSF6-203ENST00000456847 NFRKBQ6P4R8 1299 aa18.64■□□□□ 0.57
CPSF6-203ENST00000456847 PPTC7Q8NI37 304 aa18.64■□□□□ 0.57
CPSF6-203ENST00000456847 SPATA33Q96N06 139 aa18.64■□□□□ 0.57
CPSF6-203ENST00000456847 MLXIPQ9HAP2 919 aa18.64■□□□□ 0.57
CPSF6-203ENST00000456847 NOD1Q9Y239 953 aa18.64■□□□□ 0.57
CPSF6-203ENST00000456847 V9GY48 417 aaPredicted RBP18.64■□□□□ 0.57
CPSF6-203ENST00000456847 TGFB3P10600 412 aa18.63■□□□□ 0.57
CPSF6-203ENST00000456847 CELF3Q5SZQ8 465 aaKnown RBP18.63■□□□□ 0.57
CPSF6-203ENST00000456847 PCNX4Q63HM2 1172 aa18.63■□□□□ 0.57
CPSF6-203ENST00000456847 PPP1R18Q6NYC8 613 aa18.63■□□□□ 0.57
CPSF6-203ENST00000456847 EHMT1Q9H9B1 1298 aa18.63■□□□□ 0.57
CPSF6-203ENST00000456847 RANBP2P49792 3224 aaKnown RBP18.63■□□□□ 0.57
CPSF6-203ENST00000456847 hCG_1984214I3L0E3 225 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 FIBPO43427 364 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 ZNF286BP0CG31 522 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 CSF2RAP15509 400 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 PTPN11Q06124 597 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms