RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 WNT7AO00755 349 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 SORBS3O60504 671 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 SEMA3FQ13275 785 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 CCDC144BQ3MJ40 725 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 DIS3L2Q8IYB7 885 aaKnown RBP16.08■□□□□ 0.16
TIMP1-205ENST00000456754 FBXO18Q8NFZ0 1043 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 CRYGNQ8WXF5 182 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 DEFB118Q96PH6 123 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 IWS1Q96ST2 819 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 RNF208Q9H0X6 261 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
TIMP1-205ENST00000456754 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.08■□□□□ 0.16
TIMP1-205ENST00000456754 POTEFA5A3E0 1075 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 SMPD1P17405 629 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 XBP1P17861 261 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 CCND2P30279 289 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 KRT2P35908 639 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 SREBF1P36956 1147 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 ARHGAP4P98171 946 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 AP3B2Q13367 1082 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 TRIM29Q14134 588 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 STXBP2Q15833 593 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 INF2Q27J81 1249 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 PCNX4Q63HM2 1172 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 PIK3AP1Q6ZUJ8 805 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 ABHD16BQ9H3Z7 469 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 HMX1Q9NP08 348 aaPredicted RBP16.07■□□□□ 0.16
TIMP1-205ENST00000456754 PAK6Q9NQU5 681 aaPredicted RBP16.07■□□□□ 0.16
TIMP1-205ENST00000456754 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 TELO2Q9Y4R8 837 aa16.07■□□□□ 0.16
TIMP1-205ENST00000456754 MYADML2A6NDP7 307 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 ITGB5P18084 799 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 SP2Q02086 613 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 LHX8Q68G74 356 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 BICD2Q8TD16 824 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 TBCKQ8TEA7 893 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 INTS4Q96HW7 963 aaKnown RBP16.06■□□□□ 0.16
TIMP1-205ENST00000456754 WDR11Q9BZH6 1224 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 GLT8D2Q9H1C3 349 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 VTA1Q9NP79 307 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 PKD2L1Q9P0L9 805 aa16.06■□□□□ 0.16
TIMP1-205ENST00000456754 FAM86B1E9PN63 330 aa16.05■□□□□ 0.16
TIMP1-205ENST00000456754 SEPT4O43236 478 aa16.05■□□□□ 0.16
TIMP1-205ENST00000456754 EIF3JO75822 258 aaKnown RBP16.05■□□□□ 0.16
TIMP1-205ENST00000456754 TDP2O95551 362 aa16.05■□□□□ 0.16
TIMP1-205ENST00000456754 FOSP01100 380 aaPredicted RBP16.05■□□□□ 0.16
TIMP1-205ENST00000456754 FAM86B2P0C5J1 330 aa16.05■□□□□ 0.16
TIMP1-205ENST00000456754 LY6KQ17RY6 165 aa16.05■□□□□ 0.16
TIMP1-205ENST00000456754 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
TIMP1-205ENST00000456754 GALNT17Q6IS24 598 aa16.05■□□□□ 0.16
TIMP1-205ENST00000456754 DDX20Q9UHI6 824 aaKnown RBP16.05■□□□□ 0.16
TIMP1-205ENST00000456754 UBIAD1Q9Y5Z9 338 aa16.05■□□□□ 0.16
TIMP1-205ENST00000456754 LOC102724159A0A0B4J2E5 919 aa16.04■□□□□ 0.16
TIMP1-205ENST00000456754 RBM47A0AV96 593 aaKnown RBP16.04■□□□□ 0.16
TIMP1-205ENST00000456754 CCDC85CA6NKD9 419 aa16.04■□□□□ 0.16
TIMP1-205ENST00000456754 PGK1P00558 417 aa16.04■□□□□ 0.16
TIMP1-205ENST00000456754 ARP10275 920 aa16.04■□□□□ 0.16
TIMP1-205ENST00000456754 SOX10P56693 466 aa16.04■□□□□ 0.16
TIMP1-205ENST00000456754 PWP2Q15269 919 aaKnown RBP16.04■□□□□ 0.16
TIMP1-205ENST00000456754 CCDC62Q6P9F0 684 aa16.04■□□□□ 0.16
TIMP1-205ENST00000456754 KRT25Q7Z3Z0 450 aa16.04■□□□□ 0.16
TIMP1-205ENST00000456754 GJA10Q969M2 543 aa16.04■□□□□ 0.16
TIMP1-205ENST00000456754 INPP4AQ96PE3 977 aaPredicted RBP16.04■□□□□ 0.16
TIMP1-205ENST00000456754 FAM184BQ9ULE4 1060 aa16.04■□□□□ 0.16
TIMP1-205ENST00000456754 GNEQ9Y223 722 aaKnown RBP16.04■□□□□ 0.16
TIMP1-205ENST00000456754 IGLV3-22A0A075B6J6 115 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 CCDC194A0A1B0GVG4 234 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 ATP9AO75110 1047 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
TIMP1-205ENST00000456754 AKR1A1P14550 325 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 SYT1P21579 422 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 TNFAIP2Q03169 654 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 PKP1Q13835 747 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 NBR1Q14596 966 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 NONOQ15233 471 aaKnown RBP eCLIP16.03■□□□□ 0.16
TIMP1-205ENST00000456754 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 FAM177A1Q8N128 213 aaPredicted RBP16.03■□□□□ 0.16
TIMP1-205ENST00000456754 U2AF1L4Q8WU68 220 aaKnown RBP16.03■□□□□ 0.16
TIMP1-205ENST00000456754 MPHOSPH6Q99547 160 aaKnown RBP16.03■□□□□ 0.16
TIMP1-205ENST00000456754 MXRA8Q9BRK3 442 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 NRBP1Q9UHY1 535 aa16.03■□□□□ 0.16
TIMP1-205ENST00000456754 SYNRGQ9UMZ2 1314 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 VPS37CA5D8V6 355 aaPredicted RBP16.02■□□□□ 0.16
TIMP1-205ENST00000456754 H3BQV1 296 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 CTAGE5O15320 804 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 HSP90AA1P07900 732 aaKnown RBP16.02■□□□□ 0.16
TIMP1-205ENST00000456754 CYP3A4P08684 503 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 TXNP10599 105 aaKnown RBP16.02■□□□□ 0.16
TIMP1-205ENST00000456754 EN2P19622 333 aaPredicted RBP16.02■□□□□ 0.16
TIMP1-205ENST00000456754 ATP2B1P20020 1258 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 UBA1P22314 1058 aaKnown RBP16.02■□□□□ 0.16
TIMP1-205ENST00000456754 BEX3Q00994 111 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 IFFO2Q5TF58 517 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 FOXD4L5Q5VV16 416 aaPredicted RBP16.02■□□□□ 0.16
TIMP1-205ENST00000456754 FERMT3Q86UX7 667 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 FOXD4L4Q8WXT5 416 aaPredicted RBP16.02■□□□□ 0.16
TIMP1-205ENST00000456754 LENG9Q96B70 501 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 EHMT1Q9H9B1 1298 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 JADE2Q9NQC1 790 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms