RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PDHA1P08559 390 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ATF3P18847 181 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 GPTP24298 496 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 YY1P25490 414 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 MSH2P43246 934 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 CTCFP49711 727 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 LRRC63Q05C16 580 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ADRM1Q16186 407 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 HERC4Q5GLZ8 1057 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 TEDDM1Q5T9Z0 273 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ATG16L1Q676U5 607 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 TMEM154Q6P9G4 183 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 CRELD2Q6UXH1 353 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ARHGAP22Q7Z5H3 698 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 LCA5Q86VQ0 697 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 REXO1L1PQ8IX06 675 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 CEP70Q8NHQ1 597 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ZNF483Q8TF39 744 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 TRIM11Q96F44 468 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 XPO6Q96QU8 1125 aaKnown RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 PPCSQ9HAB8 311 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 KIF9Q9HAQ2 790 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 COPRSQ9NQ92 184 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 KCNG1Q9UIX4 513 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 TUBE1Q9UJT0 475 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ZNF148Q9UQR1 794 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ERVK-7P63135 1459 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 MYO1FO00160 1098 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 MAP2K7O14733 419 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 GGPS1O95749 300 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 CYP21A2P08686 494 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 PRLRP16471 622 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 RXRAP19793 462 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 POLR2FP61218 127 aaKnown RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 SLC7A5Q01650 507 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 GUCY1A3Q02108 690 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 OCA2Q04671 838 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 CWF19L2Q2TBE0 894 aaKnown RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 LETM2Q2VYF4 491 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ZMYM1Q5SVZ6 1142 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 KRT80Q6KB66 452 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 UNC5CLQ8IV45 518 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 PI4K2BQ8TCG2 481 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 TTC25Q96NG3 672 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 MTA3Q9BTC8 594 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 INTUQ9ULD6 942 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 EXOC7Q9UPT5 735 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 AGTPBP1Q9UPW5 1226 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 BTBD18B2RXH4 712 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 HAUS5O94927 633 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 PLCG2P16885 1265 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 IFNAR1P17181 557 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 FKBP3Q00688 224 aaKnown RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 DHX34Q14147 1143 aaKnown RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 WDR44Q5JSH3 913 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 SPATA21Q7Z572 469 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ZNF654Q8IZM8 581 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 FANCBQ8NB91 859 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 EAF2Q96CJ1 260 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 FAM81BQ96LP2 452 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 LRGUKQ96M69 825 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 FTOQ9C0B1 505 aaKnown RBP eCLIP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 FAM192AQ9GZU8 254 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 STK17AQ9UEE5 414 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 LIMA1Q9UHB6 759 aaKnown RBP5.43□□□□□ -1.54
PCDH9-203ENST00000456367 ZFP69BQ9UJL9 534 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 CAPN11Q9UMQ6 739 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 STX8Q9UNK0 236 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 KCNJ14Q9UNX9 436 aa5.43□□□□□ -1.54
PCDH9-203ENST00000456367 SYNGAP1Q96PV0 1343 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 SPDYE3A6NKU9 549 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 ABLIM1O14639 778 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 LIN7AO14910 233 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 DDAH1O94760 285 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MMP1P03956 469 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 VHLP40337 213 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 RCAN1P53805 252 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 PMS2P54278 862 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 SFSWAPQ12872 951 aaKnown RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MYCBPAPQ8TBZ2 947 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MAGEC3Q8TD91 643 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MORC4Q8TE76 937 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 SNX29Q8TEQ0 813 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 PAGE5Q96GU1 130 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 IWS1Q96ST2 819 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 EPC1Q9H2F5 836 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 GOLPH3LQ9H4A5 285 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 CD248Q9HCU0 757 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 TBC1D23Q9NUY8 699 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 ATP10BO94823 1461 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 SOS2Q07890 1332 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 STK10O94804 968 aaKnown RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MBD4O95243 580 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 ANXA1P04083 346 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 POLD1P28340 1107 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 NOP14P78316 857 aaKnown RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 SKOR1P84550 965 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MDM2Q00987 491 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 CTAGE3PQ8IX95 158 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 RHOT2Q8IXI1 618 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms