RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 LY6KQ17RY6 165 aa20.63■□□□□ 0.89
MSH6-207ENST00000456246 PSRC1Q6PGN9 363 aaPredicted RBP20.63■□□□□ 0.89
MSH6-207ENST00000456246 DHX32Q7L7V1 743 aaKnown RBP20.63■□□□□ 0.89
MSH6-207ENST00000456246 CUL5Q93034 780 aa20.63■□□□□ 0.89
MSH6-207ENST00000456246 PPP1R12CQ9BZL4 782 aa20.63■□□□□ 0.89
MSH6-207ENST00000456246 DDX41Q9UJV9 622 aaKnown RBP20.63■□□□□ 0.89
MSH6-207ENST00000456246 FRMPD4Q14CM0 1322 aa20.62■□□□□ 0.89
MSH6-207ENST00000456246 MMP3P08254 477 aa20.62■□□□□ 0.89
MSH6-207ENST00000456246 TGFB3P10600 412 aa20.62■□□□□ 0.89
MSH6-207ENST00000456246 MYCLP12524 364 aaPredicted RBP20.62■□□□□ 0.89
MSH6-207ENST00000456246 CASTP20810 708 aaKnown RBP20.62■□□□□ 0.89
MSH6-207ENST00000456246 EPHB4P54760 987 aa20.62■□□□□ 0.89
MSH6-207ENST00000456246 LAMC2Q13753 1193 aa20.62■□□□□ 0.89
MSH6-207ENST00000456246 FCHSD1Q86WN1 690 aa20.62■□□□□ 0.89
MSH6-207ENST00000456246 SRBD1Q8N5C6 995 aaKnown RBP20.62■□□□□ 0.89
MSH6-207ENST00000456246 FANCBQ8NB91 859 aa20.62■□□□□ 0.89
MSH6-207ENST00000456246 AFG1LQ8WV93 481 aa20.62■□□□□ 0.89
MSH6-207ENST00000456246 RBM28Q9NW13 759 aaKnown RBP20.62■□□□□ 0.89
MSH6-207ENST00000456246 PIK3CDO00329 1044 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 PLEKHA8P1O95397 391 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 DGKDQ16760 1214 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 NBPF20Q3BBV1 942 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 GNPTABQ3T906 1256 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 FAM47CQ5HY64 1035 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 TMTC3Q6ZXV5 915 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 MICU3Q86XE3 530 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 DHX37Q8IY37 1157 aaKnown RBP20.61■□□□□ 0.89
MSH6-207ENST00000456246 PPTC7Q8NI37 304 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 PIBF1Q8WXW3 757 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 NOC4LQ9BVI4 516 aaKnown RBP20.61■□□□□ 0.89
MSH6-207ENST00000456246 LRRC2Q9BYS8 371 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 TRPV6Q9H1D0 765 aa20.61■□□□□ 0.89
MSH6-207ENST00000456246 REC8O95072 547 aa20.6■□□□□ 0.89
MSH6-207ENST00000456246 CSF2RAP15509 400 aa20.6■□□□□ 0.89
MSH6-207ENST00000456246 RCAN1P53805 252 aa20.6■□□□□ 0.89
MSH6-207ENST00000456246 EXOSC10Q01780 885 aaKnown RBP20.6■□□□□ 0.89
MSH6-207ENST00000456246 ZNF697Q5TEC3 545 aa20.6■□□□□ 0.89
MSH6-207ENST00000456246 XRRA1Q6P2D8 792 aa20.6■□□□□ 0.89
MSH6-207ENST00000456246 APOA5Q6Q788 366 aa20.6■□□□□ 0.89
MSH6-207ENST00000456246 SMARCC2Q8TAQ2 1214 aa20.6■□□□□ 0.89
MSH6-207ENST00000456246 KATNAL1Q9BW62 490 aa20.6■□□□□ 0.89
MSH6-207ENST00000456246 MTIF3Q9H2K0 278 aaKnown RBP20.6■□□□□ 0.89
MSH6-207ENST00000456246 MTMR10Q9NXD2 777 aa20.6■□□□□ 0.89
MSH6-207ENST00000456246 TMEM265A0A087WTH1 108 aa20.59■□□□□ 0.89
MSH6-207ENST00000456246 RXRAP19793 462 aa20.59■□□□□ 0.89
MSH6-207ENST00000456246 CYP2C18P33260 490 aa20.59■□□□□ 0.89
MSH6-207ENST00000456246 COL9A3Q14050 684 aaPredicted RBP20.59■□□□□ 0.89
MSH6-207ENST00000456246 TEX2Q8IWB9 1127 aa20.59■□□□□ 0.89
MSH6-207ENST00000456246 RASEFQ8IZ41 740 aa20.59■□□□□ 0.89
MSH6-207ENST00000456246 IL31RAQ8NI17 732 aa20.59■□□□□ 0.89
MSH6-207ENST00000456246 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.59■□□□□ 0.89
MSH6-207ENST00000456246 IL23AQ9NPF7 189 aa20.59■□□□□ 0.89
MSH6-207ENST00000456246 LAMA2P24043 3122 aaKnown RBP20.58■□□□□ 0.89
MSH6-207ENST00000456246 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.58■□□□□ 0.89
MSH6-207ENST00000456246 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.58■□□□□ 0.89
MSH6-207ENST00000456246 EPB41L2O43491 1005 aaKnown RBP20.58■□□□□ 0.89
MSH6-207ENST00000456246 RGS20O76081 388 aa20.58■□□□□ 0.89
MSH6-207ENST00000456246 PFKMP08237 780 aa20.58■□□□□ 0.89
MSH6-207ENST00000456246 TMEM240Q5SV17 173 aa20.58■□□□□ 0.89
MSH6-207ENST00000456246 SESTD1Q86VW0 696 aa20.58■□□□□ 0.89
MSH6-207ENST00000456246 RPUSD2Q8IZ73 545 aaKnown RBP20.58■□□□□ 0.89
MSH6-207ENST00000456246 KCNB2Q92953 911 aa20.58■□□□□ 0.89
MSH6-207ENST00000456246 TRMT13Q9NUP7 481 aaKnown RBP20.58■□□□□ 0.89
MSH6-207ENST00000456246 NOD1Q9Y239 953 aa20.58■□□□□ 0.89
MSH6-207ENST00000456246 ZBTB43O43298 467 aa20.57■□□□□ 0.88
MSH6-207ENST00000456246 HOXD8P13378 290 aaPredicted RBP20.57■□□□□ 0.88
MSH6-207ENST00000456246 RTN1Q16799 776 aa20.57■□□□□ 0.88
MSH6-207ENST00000456246 ADCK5Q3MIX3 580 aa20.57■□□□□ 0.88
MSH6-207ENST00000456246 CELF3Q5SZQ8 465 aaKnown RBP20.57■□□□□ 0.88
MSH6-207ENST00000456246 Q7L0L9 218 aa20.57■□□□□ 0.88
MSH6-207ENST00000456246 INPP4AQ96PE3 977 aaPredicted RBP20.57■□□□□ 0.88
MSH6-207ENST00000456246 PSTPIP2Q9H939 334 aa20.57■□□□□ 0.88
MSH6-207ENST00000456246 STXBP5LQ9Y2K9 1186 aa20.57■□□□□ 0.88
MSH6-207ENST00000456246 PITPNM1O00562 1244 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 MEIS2O14770 477 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 FIBPO43427 364 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 PPFIA4O75335 1185 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 GGPS1O95749 300 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 F2P00734 622 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 UBA1P22314 1058 aaKnown RBP20.56■□□□□ 0.88
MSH6-207ENST00000456246 ICAM3P32942 547 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 HSPA4P34932 840 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 FGD1P98174 961 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 RASIP1Q5U651 963 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 MYSM1Q5VVJ2 828 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 ERICH6BQ5W0A0 696 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 PCNX4Q63HM2 1172 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 CCDC155Q8N6L0 562 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 SPATA33Q96N06 139 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 WNT8AQ9H1J5 351 aa20.56■□□□□ 0.88
MSH6-207ENST00000456246 UMODL1Q5DID0 1318 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 hCG_1984214I3L0E3 225 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 RFC2P35250 354 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 CCL23P55773 120 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 BFSP2Q13515 415 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 NEDD9Q14511 834 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 PPP1R18Q6NYC8 613 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 USP17L6PQ6QN14 398 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 ZNF365Q70YC5 407 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 C16orf59Q7L2K0 433 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms