RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 NSUN6Q8TEA1 469 aaKnown RBP15.03■□□□□ -0
TREX1-203ENST00000456089 MRPL11Q9Y3B7 192 aaKnown RBP15.03■□□□□ -0
TREX1-203ENST00000456089 SPTBN5Q9NRC6 3674 aaKnown RBP15.02■□□□□ -0
TREX1-203ENST00000456089 B4DLN1 442 aa15.02■□□□□ -0
TREX1-203ENST00000456089 E7EWF7 191 aa15.02■□□□□ -0
TREX1-203ENST00000456089 IFIT3O14879 490 aaKnown RBP15.02■□□□□ -0
TREX1-203ENST00000456089 CDC45O75419 566 aa15.02■□□□□ -0
TREX1-203ENST00000456089 MMP3P08254 477 aa15.02■□□□□ -0
TREX1-203ENST00000456089 MYCLP12524 364 aaPredicted RBP15.02■□□□□ -0
TREX1-203ENST00000456089 HOXA13P31271 388 aaPredicted RBP15.02■□□□□ -0
TREX1-203ENST00000456089 MRPL12P52815 198 aaKnown RBP15.02■□□□□ -0
TREX1-203ENST00000456089 STXBP2Q15833 593 aa15.02■□□□□ -0
TREX1-203ENST00000456089 BRDTQ58F21 947 aaPredicted RBP15.02■□□□□ -0
TREX1-203ENST00000456089 STOX1Q6ZVD7 989 aa15.02■□□□□ -0
TREX1-203ENST00000456089 MCF2L2Q86YR7 1114 aa15.02■□□□□ -0
TREX1-203ENST00000456089 SEZ6LQ9BYH1 1024 aa15.02■□□□□ -0
TREX1-203ENST00000456089 PXMP2Q9NR77 195 aa15.02■□□□□ -0
TREX1-203ENST00000456089 MSRAQ9UJ68 235 aa15.02■□□□□ -0
TREX1-203ENST00000456089 GH1P01241 217 aa15.01□□□□□ -0.01
TREX1-203ENST00000456089 SUPT20HL2P0C7V6 817 aa15.01□□□□□ -0.01
TREX1-203ENST00000456089 CCDC85BQ15834 202 aaPredicted RBP15.01□□□□□ -0.01
TREX1-203ENST00000456089 RNF20Q5VTR2 975 aa15.01□□□□□ -0.01
TREX1-203ENST00000456089 IL31RAQ8NI17 732 aa15.01□□□□□ -0.01
TREX1-203ENST00000456089 PIBF1Q8WXW3 757 aa15.01□□□□□ -0.01
TREX1-203ENST00000456089 KAT2BQ92831 832 aa15.01□□□□□ -0.01
TREX1-203ENST00000456089 PIGSQ96S52 555 aa15.01□□□□□ -0.01
TREX1-203ENST00000456089 AMNQ9BXJ7 453 aa15.01□□□□□ -0.01
TREX1-203ENST00000456089 MTIF3Q9H2K0 278 aaKnown RBP15.01□□□□□ -0.01
TREX1-203ENST00000456089 SLC4A7Q9Y6M7 1214 aa15.01□□□□□ -0.01
TREX1-203ENST00000456089 PALM3A6NDB9 673 aaPredicted RBP15□□□□□ -0.01
TREX1-203ENST00000456089 ZBTB5O15062 677 aa15□□□□□ -0.01
TREX1-203ENST00000456089 NR3C2P08235 984 aa15□□□□□ -0.01
TREX1-203ENST00000456089 ZNF286BP0CG31 522 aa15□□□□□ -0.01
TREX1-203ENST00000456089 HSD17B4P51659 736 aa15□□□□□ -0.01
TREX1-203ENST00000456089 ADGRE1Q14246 886 aa15□□□□□ -0.01
TREX1-203ENST00000456089 GRM4Q14833 912 aa15□□□□□ -0.01
TREX1-203ENST00000456089 WTAPQ15007 396 aa15□□□□□ -0.01
TREX1-203ENST00000456089 RAB30Q15771 203 aa15□□□□□ -0.01
TREX1-203ENST00000456089 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
TREX1-203ENST00000456089 GDF6Q6KF10 455 aaPredicted RBP15□□□□□ -0.01
TREX1-203ENST00000456089 NFRKBQ6P4R8 1299 aa15□□□□□ -0.01
TREX1-203ENST00000456089 RPUSD2Q8IZ73 545 aaKnown RBP15□□□□□ -0.01
TREX1-203ENST00000456089 MTMR8Q96EF0 704 aa15□□□□□ -0.01
TREX1-203ENST00000456089 GAS2L1Q99501 681 aaPredicted RBP15□□□□□ -0.01
TREX1-203ENST00000456089 ALG1Q9BT22 464 aa15□□□□□ -0.01
TREX1-203ENST00000456089 LSG1Q9H089 658 aaKnown RBP15□□□□□ -0.01
TREX1-203ENST00000456089 PPP4R2Q9NY27 417 aa15□□□□□ -0.01
TREX1-203ENST00000456089 DDX41Q9UJV9 622 aaKnown RBP15□□□□□ -0.01
TREX1-203ENST00000456089 PCDHA1Q9Y5I3 950 aa15□□□□□ -0.01
TREX1-203ENST00000456089 MRVI1Q9Y6F6 885 aa15□□□□□ -0.01
TREX1-203ENST00000456089 CYTH3O43739 400 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 KPNA6O60684 536 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 IQCF3P0C7M6 154 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 IGFBP4P22692 258 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 ANTXR2P58335 489 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 COL9A3Q14050 684 aaPredicted RBP14.99□□□□□ -0.01
TREX1-203ENST00000456089 PTGISQ16647 500 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 TMEM67Q5HYA8 995 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 GPKOWQ92917 476 aaPredicted RBP eCLIP14.99□□□□□ -0.01
TREX1-203ENST00000456089 CTAGE1Q96RT6 745 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 IWS1Q96ST2 819 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 SLC28A3Q9HAS3 691 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 NOD1Q9Y239 953 aa14.99□□□□□ -0.01
TREX1-203ENST00000456089 TCF20Q9UGU0 1960 aaKnown RBP14.98□□□□□ -0.01
TREX1-203ENST00000456089 COL4A4P53420 1690 aaPredicted RBP14.98□□□□□ -0.01
TREX1-203ENST00000456089 SLC27A2O14975 620 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 RGS20O76081 388 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 ATP2A2P16615 1042 aaKnown RBP14.98□□□□□ -0.01
TREX1-203ENST00000456089 PPP2R2DQ66LE6 453 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 CREB3L3Q68CJ9 461 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 CATIPQ7Z7H3 387 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 FCHSD1Q86WN1 690 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 RETREG2Q8NC44 543 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 PDCD2LQ9BRP1 358 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 MYL10Q9BUA6 226 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 FTOQ9C0B1 505 aaKnown RBP eCLIP14.98□□□□□ -0.01
TREX1-203ENST00000456089 CERS4Q9HA82 394 aa14.98□□□□□ -0.01
TREX1-203ENST00000456089 RFXAPO00287 272 aa14.97□□□□□ -0.01
TREX1-203ENST00000456089 EIF3JO75822 258 aaKnown RBP14.97□□□□□ -0.01
TREX1-203ENST00000456089 MCM5P33992 734 aa14.97□□□□□ -0.01
TREX1-203ENST00000456089 PSEN2P49810 448 aa14.97□□□□□ -0.01
TREX1-203ENST00000456089 ZNF200P98182 395 aaPredicted RBP14.97□□□□□ -0.01
TREX1-203ENST00000456089 PTPN11Q06124 597 aaPredicted RBP14.97□□□□□ -0.01
TREX1-203ENST00000456089 PGM5Q15124 567 aa14.97□□□□□ -0.01
TREX1-203ENST00000456089 NFXL1Q6ZNB6 911 aa14.97□□□□□ -0.01
TREX1-203ENST00000456089 TMCO2Q7Z6W1 182 aaPredicted RBP14.97□□□□□ -0.01
TREX1-203ENST00000456089 DHX38Q92620 1227 aaKnown RBP14.97□□□□□ -0.01
TREX1-203ENST00000456089 BCAS3Q9H6U6 928 aa14.97□□□□□ -0.01
TREX1-203ENST00000456089 RIOX1Q9H6W3 641 aa14.97□□□□□ -0.01
TREX1-203ENST00000456089 HDAC6Q9UBN7 1215 aa14.97□□□□□ -0.01
TREX1-203ENST00000456089 PITPNM1O00562 1244 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 TRANK1O15050 2925 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 ARHGEF15O94989 841 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 CASTP20810 708 aaKnown RBP14.96□□□□□ -0.01
TREX1-203ENST00000456089 SP2Q02086 613 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 TROAPQ12815 778 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 BFSP2Q13515 415 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 HIC1Q14526 733 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 MFSD10Q14728 455 aa14.96□□□□□ -0.01
TREX1-203ENST00000456089 NECTIN1Q15223 517 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms