RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 TSPYL2Q9H2G4 693 aaPredicted RBP20.54■□□□□ 0.88
CCDC144B-204ENST00000455629 CNNM2Q9H8M5 875 aa20.54■□□□□ 0.88
CCDC144B-204ENST00000455629 COL20A1Q9P218 1284 aa20.54■□□□□ 0.88
CCDC144B-204ENST00000455629 NCOR1O75376 2440 aa20.54■□□□□ 0.88
CCDC144B-204ENST00000455629 MMP3P08254 477 aa20.53■□□□□ 0.88
CCDC144B-204ENST00000455629 PTGISQ16647 500 aa20.53■□□□□ 0.88
CCDC144B-204ENST00000455629 SKAP1Q86WV1 359 aa20.53■□□□□ 0.88
CCDC144B-204ENST00000455629 CAGE1Q8TC20 777 aa20.53■□□□□ 0.88
CCDC144B-204ENST00000455629 PPP1R13LQ8WUF5 828 aa20.53■□□□□ 0.88
CCDC144B-204ENST00000455629 UBAC1Q9BSL1 405 aa20.53■□□□□ 0.88
CCDC144B-204ENST00000455629 FTOQ9C0B1 505 aaKnown RBP eCLIP20.53■□□□□ 0.88
CCDC144B-204ENST00000455629 JMJD4Q9H9V9 463 aa20.53■□□□□ 0.88
CCDC144B-204ENST00000455629 EIF3JO75822 258 aaKnown RBP20.52■□□□□ 0.88
CCDC144B-204ENST00000455629 BAIAP3O94812 1187 aa20.52■□□□□ 0.88
CCDC144B-204ENST00000455629 CA3P07451 260 aa20.52■□□□□ 0.88
CCDC144B-204ENST00000455629 CASTP20810 708 aaKnown RBP20.52■□□□□ 0.88
CCDC144B-204ENST00000455629 CHMP4BP1P59074 171 aa20.52■□□□□ 0.88
CCDC144B-204ENST00000455629 LY6KQ17RY6 165 aa20.52■□□□□ 0.88
CCDC144B-204ENST00000455629 ARHGEF16Q5VV41 709 aa20.52■□□□□ 0.88
CCDC144B-204ENST00000455629 AFAP1L1Q8TED9 768 aa20.52■□□□□ 0.88
CCDC144B-204ENST00000455629 EMID1Q96A84 441 aaPredicted RBP20.52■□□□□ 0.88
CCDC144B-204ENST00000455629 TRIP12Q14669 1992 aaPredicted RBP20.52■□□□□ 0.87
CCDC144B-204ENST00000455629 KIF28PB7ZC32 967 aa20.51■□□□□ 0.87
CCDC144B-204ENST00000455629 POU3F3P20264 500 aaPredicted RBP20.51■□□□□ 0.87
CCDC144B-204ENST00000455629 DGKDQ16760 1214 aa20.51■□□□□ 0.87
CCDC144B-204ENST00000455629 IL27Q8NEV9 243 aa20.51■□□□□ 0.87
CCDC144B-204ENST00000455629 AMNQ9BXJ7 453 aa20.51■□□□□ 0.87
CCDC144B-204ENST00000455629 VAT1LQ9HCJ6 419 aa20.51■□□□□ 0.87
CCDC144B-204ENST00000455629 DDX41Q9UJV9 622 aaKnown RBP20.51■□□□□ 0.87
CCDC144B-204ENST00000455629 BDP1A6H8Y1 2624 aa20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 REV3LO60673 3130 aa20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 TET1Q8NFU7 2136 aa20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 PARNO95453 639 aaKnown RBP20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 IFIT1BQ5T764 474 aaKnown RBP20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 CHST3Q7LGC8 479 aa20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 HERC6Q8IVU3 1022 aa20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 ADAMTS19Q8TE59 1207 aa20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 KAT2BQ92831 832 aa20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 PXMP2Q9NR77 195 aa20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 MAP3K20Q9NYL2 800 aaKnown RBP20.5■□□□□ 0.87
CCDC144B-204ENST00000455629 GTPBP6O43824 516 aaPredicted RBP20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 CFBP00751 764 aa20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 NR3C2P08235 984 aa20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 EIF2AK2P19525 551 aaKnown RBP20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 HSD17B4P51659 736 aa20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 GHRHRQ02643 423 aa20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 LAMC2Q13753 1193 aa20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 GDF6Q6KF10 455 aaPredicted RBP20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 CTAGE1Q96RT6 745 aa20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 KATNAL1Q9BW62 490 aa20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 MRVI1Q9Y6F6 885 aa20.49■□□□□ 0.87
CCDC144B-204ENST00000455629 SELPP16109 830 aa20.48■□□□□ 0.87
CCDC144B-204ENST00000455629 KCNJ6P48051 423 aa20.48■□□□□ 0.87
CCDC144B-204ENST00000455629 RBL2Q08999 1139 aa20.48■□□□□ 0.87
CCDC144B-204ENST00000455629 MICALL1Q8N3F8 863 aa20.48■□□□□ 0.87
CCDC144B-204ENST00000455629 SAMD3Q8N6K7 520 aa20.48■□□□□ 0.87
CCDC144B-204ENST00000455629 C7orf31Q8N865 590 aa20.48■□□□□ 0.87
CCDC144B-204ENST00000455629 PPTC7Q8NI37 304 aa20.48■□□□□ 0.87
CCDC144B-204ENST00000455629 MTMR8Q96EF0 704 aa20.48■□□□□ 0.87
CCDC144B-204ENST00000455629 GTF2IRD1Q9UHL9 959 aa20.48■□□□□ 0.87
CCDC144B-204ENST00000455629 PRRC2BQ5JSZ5 2229 aaKnown RBP20.47■□□□□ 0.87
CCDC144B-204ENST00000455629 KLRF2D3W0D1 207 aa20.47■□□□□ 0.87
CCDC144B-204ENST00000455629 TAP1Q03518 808 aa20.47■□□□□ 0.87
CCDC144B-204ENST00000455629 SEC23AQ15436 765 aa20.47■□□□□ 0.87
CCDC144B-204ENST00000455629 AAK1Q2M2I8 961 aa20.47■□□□□ 0.87
CCDC144B-204ENST00000455629 KCNV1Q6PIU1 500 aa20.47■□□□□ 0.87
CCDC144B-204ENST00000455629 LRRC8DQ7L1W4 858 aa20.47■□□□□ 0.87
CCDC144B-204ENST00000455629 STAG2Q8N3U4 1231 aa20.47■□□□□ 0.87
CCDC144B-204ENST00000455629 MTCH2Q9Y6C9 303 aa20.47■□□□□ 0.87
CCDC144B-204ENST00000455629 OPLAHO14841 1288 aa20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 ZBTB5O15062 677 aa20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 F2P00734 622 aa20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 PSEN2P49810 448 aa20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 TRAF1Q13077 416 aa20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 STOX1Q6ZVD7 989 aa20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 UHRF1Q96T88 793 aaPredicted RBP20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 HDAC6Q9UBN7 1215 aa20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 PCDHA1Q9Y5I3 950 aa20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 MYH7BA7E2Y1 1941 aa20.46■□□□□ 0.87
CCDC144B-204ENST00000455629 PALM3A6NDB9 673 aaPredicted RBP20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 RFXAPO00287 272 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 TLL1O43897 1013 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 PPFIA4O75335 1185 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 CXCL10P02778 98 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 HOXD8P13378 290 aaPredicted RBP20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 MFSD10Q14728 455 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 GPNMBQ14956 572 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 TTC22Q5TAA0 569 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 CNKSR3Q6P9H4 555 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 DHX37Q8IY37 1157 aaKnown RBP20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 ARNTL2Q8WYA1 636 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 DHX38Q92620 1227 aaKnown RBP20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 PDCD2LQ9BRP1 358 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 CERS4Q9HA82 394 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 MAD2L2Q9UI95 211 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 XIRP2A4UGR9 3374 aa20.45■□□□□ 0.86
CCDC144B-204ENST00000455629 HAS3O00219 553 aa20.44■□□□□ 0.86
CCDC144B-204ENST00000455629 PPP1R11O60927 126 aaPredicted RBP20.44■□□□□ 0.86
CCDC144B-204ENST00000455629 CKBP12277 381 aa20.44■□□□□ 0.86
CCDC144B-204ENST00000455629 WDR5P61964 334 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms