RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 PDRG1Q9NUG6 133 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 Q9Y3F1 56 aa13.03□□□□□ -0.32
HDAC9-217ENST00000455069 MOXD2PA6NHM9 499 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 ADAMTS3O15072 1205 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 RTP1P59025 263 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 MRPS9P82933 396 aaKnown RBP13.02□□□□□ -0.33
HDAC9-217ENST00000455069 STXBP2Q15833 593 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 FSCN1Q16658 493 aaKnown RBP13.02□□□□□ -0.33
HDAC9-217ENST00000455069 PFKFB3Q16875 520 aaPredicted RBP13.02□□□□□ -0.33
HDAC9-217ENST00000455069 TRIM60Q495X7 471 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 GNASQ5JWF2 1037 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 SEPT14Q6ZU15 432 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 VSIG10LQ86VR7 867 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 PHKBQ93100 1093 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 GDF15Q99988 308 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 PSTPIP2Q9H939 334 aa13.02□□□□□ -0.33
HDAC9-217ENST00000455069 ZMYND8Q9ULU4 1186 aaPredicted RBP13.02□□□□□ -0.33
HDAC9-217ENST00000455069 CCDC196A0A1B0GTZ2 297 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 B4DLN1 442 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 EIF3JO75822 258 aaKnown RBP13.01□□□□□ -0.33
HDAC9-217ENST00000455069 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
HDAC9-217ENST00000455069 MYCLP12524 364 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-217ENST00000455069 SCG2P13521 617 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 IFNAR1P17181 557 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 SYN1P17600 705 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 MRPL12P52815 198 aaKnown RBP13.01□□□□□ -0.33
HDAC9-217ENST00000455069 AK2P54819 239 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 ARHGAP1Q07960 439 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 LY6KQ17RY6 165 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 C1orf53Q5VUE5 145 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 CXCL17Q6UXB2 119 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 PCSK9Q8NBP7 692 aaKnown RBP13.01□□□□□ -0.33
HDAC9-217ENST00000455069 SMARCC2Q8TAQ2 1214 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 ZNF274Q96GC6 653 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-217ENST00000455069 SPC25Q9HBM1 224 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 BARHL2Q9NY43 387 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 TPCN1Q9ULQ1 816 aa13.01□□□□□ -0.33
HDAC9-217ENST00000455069 GRIN2DO15399 1336 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 NKRFO15226 690 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC9-217ENST00000455069 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
HDAC9-217ENST00000455069 LARGE1O95461 756 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 CCND2P30279 289 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 BMP8BP34820 402 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 NAPAP54920 295 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 SCRN1Q12765 414 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 STK3Q13188 491 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 SEMA3FQ13275 785 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 TTLL4Q14679 1199 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 OR6J1Q8NGC5 347 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 CUL5Q93034 780 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 KIF2CQ99661 725 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 RNF26Q9BY78 433 aaPredicted RBP13□□□□□ -0.33
HDAC9-217ENST00000455069 AP5M1Q9H0R1 490 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
HDAC9-217ENST00000455069 STARD7Q9NQZ5 370 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 DDX41Q9UJV9 622 aaKnown RBP13□□□□□ -0.33
HDAC9-217ENST00000455069 ATP11BQ9Y2G3 1177 aa13□□□□□ -0.33
HDAC9-217ENST00000455069 ELP1O95163 1332 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 hCG_1984214I3L0E3 225 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 SOX1O00570 391 aaPredicted RBP12.99□□□□□ -0.33
HDAC9-217ENST00000455069 DTNBO60941 627 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
HDAC9-217ENST00000455069 PURAQ00577 322 aaKnown RBP12.99□□□□□ -0.33
HDAC9-217ENST00000455069 SP2Q02086 613 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 PCNX4Q63HM2 1172 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 SH3RF1Q7Z6J0 888 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 ZNF713Q8N859 430 aaPredicted RBP12.99□□□□□ -0.33
HDAC9-217ENST00000455069 PGBD1Q96JS3 809 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 GLT1D1Q96MS3 346 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 INPP4AQ96PE3 977 aaPredicted RBP12.99□□□□□ -0.33
HDAC9-217ENST00000455069 SLC26A6Q9BXS9 759 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 PDLIM7Q9NR12 457 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 MRVI1Q9Y6F6 885 aa12.99□□□□□ -0.33
HDAC9-217ENST00000455069 SMCO2A6NFE2 343 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 A6NJR5 290 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 EIF5BO60841 1220 aaKnown RBP12.98□□□□□ -0.33
HDAC9-217ENST00000455069 UBA1P22314 1058 aaKnown RBP12.98□□□□□ -0.33
HDAC9-217ENST00000455069 CDK7P50613 346 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 ADCY7P51828 1080 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 PSMC6P62333 389 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 TLE2Q04725 743 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 ANKRD33Q7Z3H0 272 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 SLC43A3Q8NBI5 491 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 BCAS3Q9H6U6 928 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 TMEM260Q9NX78 707 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 RTEL1Q9NZ71 1219 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 PCDHA6Q9UN73 950 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 PCDHA8Q9Y5H6 950 aa12.98□□□□□ -0.33
HDAC9-217ENST00000455069 TRIP12Q14669 1992 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-217ENST00000455069 COL6A3P12111 3177 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 A0A0U1RQG5 324 aaPredicted RBP12.97□□□□□ -0.33
HDAC9-217ENST00000455069 ESYT2A0FGR8 921 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 SORBS3O60504 671 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 PFKFB2O60825 505 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 PQBP1O60828 265 aaKnown RBP12.97□□□□□ -0.33
HDAC9-217ENST00000455069 CTDNEP1O95476 244 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 GH1P01241 217 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 MMP3P08254 477 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms