RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 EPB41L4AQ9HCS5 686 aaPredicted RBP11.05□□□□□ -0.64
CSGALNACT1-203ENST00000454498 RWDD2AQ9UIY3 292 aa11.05□□□□□ -0.64
CSGALNACT1-203ENST00000454498 GDAQ9Y2T3 454 aa11.05□□□□□ -0.64
CSGALNACT1-203ENST00000454498 DAGLAQ9Y4D2 1042 aa11.05□□□□□ -0.64
CSGALNACT1-203ENST00000454498 KIF28PB7ZC32 967 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 IGSF3O75054 1194 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 TBC1D10BQ4KMP7 808 aaPredicted RBP11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 POMGNT1Q8WZA1 660 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 BARHL2Q9NY43 387 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 POTEMA6NI47 508 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 ACTN4O43707 911 aaKnown RBP11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 N4BP1O75113 896 aaKnown RBP11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 GAP43P17677 238 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 ANTXR2P58335 489 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 AP3B2Q13367 1082 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 ZNF354CQ86Y25 554 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 SRBD1Q8N5C6 995 aaKnown RBP11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 SLC7A3Q8WY07 619 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 BCL2L12Q9HB09 334 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 AGTPBP1Q9UPW5 1226 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 A0A0G2JLW4 131 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 ZNF365Q70YC5 407 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 DAAM2Q86T65 1068 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 IQCGQ9H095 443 aaKnown RBP11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 NRBP2Q9NSY0 501 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 SLC5A4Q9NY91 659 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 USTQ9Y2C2 406 aa11.04□□□□□ -0.64
CSGALNACT1-203ENST00000454498 ZEB2O60315 1214 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 RBL2Q08999 1139 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 RCSD1Q6JBY9 416 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 RETREG2Q8NC44 543 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 UBLCP1Q8WVY7 318 aaPredicted RBP11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 CDHR1Q96JP9 859 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 PAIP2Q9BPZ3 127 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 C1orf112Q9NSG2 853 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 OGFRQ9NZT2 677 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 ADD3Q9UEY8 706 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 QRICH1Q2TAL8 776 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 SBK1Q52WX2 424 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 IFT20Q8IY31 132 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 FAM186BQ8IYM0 893 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 TTC16Q8NEE8 873 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 ZFP91Q96JP5 570 aaPredicted RBP11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 CEP170P1Q96L14 293 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 STMN4Q9H169 189 aaPredicted RBP11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 REREQ9P2R6 1566 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 ARHGAP23Q9P227 1491 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 SLIT1O75093 1534 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 CLIC2O15247 247 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 CUL4BQ13620 913 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 VSTM4Q8IW00 320 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 MAK16Q9BXY0 300 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 FAM184BQ9ULE4 1060 aa11.03□□□□□ -0.64
CSGALNACT1-203ENST00000454498 BUB1O43683 1085 aa11.02□□□□□ -0.64
CSGALNACT1-203ENST00000454498 ARHGAP4P98171 946 aa11.02□□□□□ -0.64
CSGALNACT1-203ENST00000454498 PPP1R14CQ8TAE6 165 aa11.02□□□□□ -0.64
CSGALNACT1-203ENST00000454498 RPGRIP1Q96KN7 1286 aa11.02□□□□□ -0.64
CSGALNACT1-203ENST00000454498 PARVGQ9HBI0 331 aa11.02□□□□□ -0.64
CSGALNACT1-203ENST00000454498 AMFRQ9UKV5 643 aa11.02□□□□□ -0.64
CSGALNACT1-203ENST00000454498 PCDHA6Q9UN73 950 aa11.02□□□□□ -0.64
CSGALNACT1-203ENST00000454498 PCDHA8Q9Y5H6 950 aa11.02□□□□□ -0.64
CSGALNACT1-203ENST00000454498 PTPROQ16827 1216 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SHC4Q6S5L8 630 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 RICTORQ6R327 1708 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PRPF6O94906 941 aaKnown RBP11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 TCP1P17987 556 aaKnown RBP11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 CA8P35219 290 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PSMC2P35998 433 aaKnown RBP11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PSMD2Q13200 908 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 WHAMMP3Q1A5X7 153 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SEPT14Q6ZU15 432 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SELENOSQ9BQE4 189 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 TMEM260Q9NX78 707 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ANKFY1Q9P2R3 1169 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 UTP11Q9Y3A2 253 aaKnown RBP11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SALL3Q9BXA9 1300 aa11.02□□□□□ -0.65
CSGALNACT1-203ENST00000454498 CCNA1P78396 465 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SPP2Q13103 211 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 STRIP1Q5VSL9 837 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 EEPD1Q7L9B9 569 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PPP1R13BQ96KQ4 1090 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SENP2Q9HC62 589 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ASIC3Q9UHC3 531 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FLT1P17948 1338 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 CTTNQ14247 550 aaKnown RBP11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 KRT31Q15323 416 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ADPGKQ9BRR6 497 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 ST7Q9NRC1 585 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 HYOU1Q9Y4L1 999 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 KCNK3O14649 394 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 IGBP1P78318 339 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 PPP2R5AQ15172 486 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FAM160B1Q5W0V3 765 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SARM1Q6SZW1 724 aa11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 SND1Q7KZF4 910 aaKnown RBP eCLIP11.01□□□□□ -0.65
CSGALNACT1-203ENST00000454498 FAM76AQ8TAV0 307 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms