RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 LCA5LO95447 670 aa17.41■□□□□ 0.38
TRA2B-205ENST00000453386 GBP6Q6ZN66 633 aa17.41■□□□□ 0.38
TRA2B-205ENST00000453386 LARP4BQ92615 738 aaKnown RBP17.41■□□□□ 0.38
TRA2B-205ENST00000453386 FAM107BQ9H098 131 aa17.41■□□□□ 0.38
TRA2B-205ENST00000453386 BLOC1S4Q9NUP1 217 aa17.41■□□□□ 0.38
TRA2B-205ENST00000453386 MYH10P35580 1976 aa17.41■□□□□ 0.38
TRA2B-205ENST00000453386 EIF3HO15372 352 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRA2B-205ENST00000453386 LIG3P49916 1009 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 CALCRLQ16602 461 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 CFAP221Q4G0U5 840 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 ALS2CLQ60I27 953 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 KCTD16Q68DU8 428 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 REXO1Q8N1G1 1221 aaKnown RBP17.4■□□□□ 0.38
TRA2B-205ENST00000453386 BAP1Q92560 729 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 RUBCNQ92622 972 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 SH3GL2Q99962 352 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 FAM169AQ9Y6X4 670 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 ESYT3A0FGR9 886 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 RASA1P20936 1047 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 GUF1Q8N442 669 aaKnown RBP17.4■□□□□ 0.38
TRA2B-205ENST00000453386 PIGSQ96S52 555 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 SPZ1Q9BXG8 430 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 UBA5Q9GZZ9 404 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 SAMM50Q9Y512 469 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 BAG3O95817 575 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 ENOX2Q16206 610 aaKnown RBP17.4■□□□□ 0.38
TRA2B-205ENST00000453386 COBLL1Q53SF7 1204 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 TTMPQ5BVD1 217 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 KLHDC7AQ5VTJ3 777 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 PDXDC1Q6P996 788 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 GLIS3Q8NEA6 775 aa17.4■□□□□ 0.38
TRA2B-205ENST00000453386 PVALEFA0A1B0GWK0 134 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 RNASE9P60153 205 aaKnown RBP17.39■□□□□ 0.37
TRA2B-205ENST00000453386 EYA3Q99504 573 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 TSG101Q99816 390 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 PHLPP1O60346 1717 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 POTEMA6NI47 508 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 KRT14P02533 472 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 GLI1P08151 1106 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 ATP1A2P50993 1020 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 ARID5AQ03989 594 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 PDCLQ13371 301 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 TMEM266Q2M3C6 531 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 ICE2Q659A1 982 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 IFT20Q8IY31 132 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 SH2D3CQ8N5H7 860 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
TRA2B-205ENST00000453386 IPO4Q8TEX9 1081 aaKnown RBP17.39■□□□□ 0.37
TRA2B-205ENST00000453386 ZIM3Q96PE6 472 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 PNMA5Q96PV4 448 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 NFU1Q9UMS0 254 aa17.39■□□□□ 0.37
TRA2B-205ENST00000453386 XIRP1Q702N8 1843 aaKnown RBP17.39■□□□□ 0.37
TRA2B-205ENST00000453386 FTCDO95954 541 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 CARSP49589 748 aaKnown RBP17.38■□□□□ 0.37
TRA2B-205ENST00000453386 GUCY2DQ02846 1103 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 LRRC63Q05C16 580 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 NBPF5PQ86XG9 351 aaPredicted RBP17.38■□□□□ 0.37
TRA2B-205ENST00000453386 DDX12PQ92771 950 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 EPB41L5Q9HCM4 733 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 POLD4Q9HCU8 107 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 STK17AQ9UEE5 414 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 MYH14Q7Z406 1995 aaKnown RBP17.38■□□□□ 0.37
TRA2B-205ENST00000453386 ZSCAN5CA6NGD5 496 aaPredicted RBP17.38■□□□□ 0.37
TRA2B-205ENST00000453386 PJA2O43164 708 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 KCNQ2O43526 872 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 GTF2A1P52655 376 aaPredicted RBP17.38■□□□□ 0.37
TRA2B-205ENST00000453386 GRIK5Q16478 980 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 SLC9C1Q4G0N8 1177 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 CCDC40Q4G0X9 1142 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 SNX29Q8TEQ0 813 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 CCDC43Q96MW1 224 aaKnown RBP17.38■□□□□ 0.37
TRA2B-205ENST00000453386 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 GRIN2DO15399 1336 aa17.38■□□□□ 0.37
TRA2B-205ENST00000453386 TRAF5O00463 557 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 ZEB2O60315 1214 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 ERLIN2O94905 339 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 HEXIM1O94992 359 aaKnown RBP17.37■□□□□ 0.37
TRA2B-205ENST00000453386 GUCY2FP51841 1108 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 NNTQ13423 1086 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 ASTE1Q2TB18 679 aaPredicted RBP17.37■□□□□ 0.37
TRA2B-205ENST00000453386 CFAP58Q5T655 872 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 LRRC55Q6ZSA7 311 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 CAVIN3Q969G5 261 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRA2B-205ENST00000453386 SLC37A4O43826 429 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 PALMO75781 387 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 TDP2O95551 362 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 SLC10A5Q5PT55 438 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 SFMBT2Q5VUG0 894 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 KRT79Q5XKE5 535 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 RNF10Q8N5U6 811 aaKnown RBP17.37■□□□□ 0.37
TRA2B-205ENST00000453386 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 NDUFAB1O14561 156 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 SSBP05455 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRA2B-205ENST00000453386 FAM153BP0C7A2 387 aa17.37■□□□□ 0.37
TRA2B-205ENST00000453386 EPB41P11171 864 aaKnown RBP17.37■□□□□ 0.37
TRA2B-205ENST00000453386 POLR2FP61218 127 aaKnown RBP17.37■□□□□ 0.37
TRA2B-205ENST00000453386 FAM153CQ494X1 144 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms