RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 KLHL36Q8N4N3 616 aa5.12□□□□□ -1.59
VPS8-212ENST00000452666 SMARCC1Q92922 1105 aaPredicted RBP5.12□□□□□ -1.59
VPS8-212ENST00000452666 GP6Q9HCN6 339 aa5.12□□□□□ -1.59
VPS8-212ENST00000452666 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS8-212ENST00000452666 PPP1R11O60927 126 aaPredicted RBP5.11□□□□□ -1.59
VPS8-212ENST00000452666 ANKRD39Q53RE8 183 aa5.11□□□□□ -1.59
VPS8-212ENST00000452666 EAPPQ56P03 285 aaPredicted RBP5.11□□□□□ -1.59
VPS8-212ENST00000452666 LDLRAD3Q86YD5 345 aa5.11□□□□□ -1.59
VPS8-212ENST00000452666 BARX1Q9HBU1 254 aaPredicted RBP5.11□□□□□ -1.59
VPS8-212ENST00000452666 FTSJ1Q9UET6 329 aa5.11□□□□□ -1.59
VPS8-212ENST00000452666 MEIS3P2A8K0S8 358 aa5.1□□□□□ -1.59
VPS8-212ENST00000452666 FOXS1O43638 330 aa5.1□□□□□ -1.59
VPS8-212ENST00000452666 HMGB1P09429 215 aaKnown RBP5.1□□□□□ -1.59
VPS8-212ENST00000452666 CDK11BP21127 795 aaKnown RBP5.1□□□□□ -1.59
VPS8-212ENST00000452666 IL12RB1P42701 662 aa5.1□□□□□ -1.59
VPS8-212ENST00000452666 TAGLNQ01995 201 aaKnown RBP5.1□□□□□ -1.59
VPS8-212ENST00000452666 EDAQ92838 391 aa5.1□□□□□ -1.59
VPS8-212ENST00000452666 EXTL1Q92935 676 aa5.1□□□□□ -1.59
VPS8-212ENST00000452666 SLC9A7Q96T83 725 aa5.1□□□□□ -1.59
VPS8-212ENST00000452666 SEC61A2Q9H9S3 476 aa5.1□□□□□ -1.59
VPS8-212ENST00000452666 CDK11AQ9UQ88 783 aaPredicted RBP5.1□□□□□ -1.59
VPS8-212ENST00000452666 NKX3-2P78367 333 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 DGCR2P98153 550 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 NFATC3Q12968 1075 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 DCAF15Q66K64 600 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 TCTN3Q6NUS6 607 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 MRGPRGQ86SM5 289 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 FAM126BQ8IXS8 530 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 ZDHHC15Q96MV8 337 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 CLIC6Q96NY7 704 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 BCL11AQ9H165 835 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 NOL6Q9H6R4 1146 aaKnown RBP5.09□□□□□ -1.59
VPS8-212ENST00000452666 ZDHHC9Q9Y397 364 aa5.09□□□□□ -1.59
VPS8-212ENST00000452666 FUCA1P04066 466 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 ADH4P08319 380 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 CTSHP09668 335 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 ITGA4P13612 1032 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 CD247P20963 164 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 PMS1P54277 932 aaKnown RBP5.08□□□□□ -1.6
VPS8-212ENST00000452666 MLLT6P55198 1093 aaPredicted RBP5.08□□□□□ -1.6
VPS8-212ENST00000452666 KRTAP10-9P60411 292 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 CLCQ05315 142 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 PSMD2Q13200 908 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 TDRD10Q5VZ19 366 aaKnown RBP5.08□□□□□ -1.6
VPS8-212ENST00000452666 FBXL19Q6PCT2 694 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 GK5Q6ZS86 529 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 REXO1Q8N1G1 1221 aaKnown RBP5.08□□□□□ -1.6
VPS8-212ENST00000452666 GNRHR2Q96P88 292 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 AGAP2Q99490 1192 aa5.08□□□□□ -1.6
VPS8-212ENST00000452666 SUPT16HQ9Y5B9 1047 aaKnown RBP5.08□□□□□ -1.6
VPS8-212ENST00000452666 FAM86C2PA6NEL3 165 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 SGSM2O43147 1006 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 NPHS1O60500 1241 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 STAT5AP42229 794 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 SEPHS1P49903 392 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 CR1LQ2VPA4 569 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 CPNE8Q86YQ8 564 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 GIMAP8Q8ND71 665 aaPredicted RBP5.07□□□□□ -1.6
VPS8-212ENST00000452666 SEC14L1Q92503 715 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 ZSWIM3Q96MP5 696 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 WRNIP1Q96S55 665 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 YIPF4Q9BSR8 244 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 KCNQ5Q9NR82 932 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 DMRT1Q9Y5R6 373 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 SHROOM4Q9ULL8 1493 aa5.07□□□□□ -1.6
VPS8-212ENST00000452666 TRBV23OR9-2A0A075B6M9 112 aa5.06□□□□□ -1.6
VPS8-212ENST00000452666 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
VPS8-212ENST00000452666 AURKAO14965 403 aa5.06□□□□□ -1.6
VPS8-212ENST00000452666 CNOT4O95628 575 aaKnown RBP5.06□□□□□ -1.6
VPS8-212ENST00000452666 TCF3P15923 654 aa5.06□□□□□ -1.6
VPS8-212ENST00000452666 COMTP21964 271 aa5.06□□□□□ -1.6
VPS8-212ENST00000452666 DAB2P98082 770 aa5.06□□□□□ -1.6
VPS8-212ENST00000452666 AXDND1Q5T1B0 1012 aaPredicted RBP5.06□□□□□ -1.6
VPS8-212ENST00000452666 INTS3Q68E01 1043 aaKnown RBP5.06□□□□□ -1.6
VPS8-212ENST00000452666 ZCCHC14Q8WYQ9 949 aaKnown RBP5.06□□□□□ -1.6
VPS8-212ENST00000452666 LMF1Q96S06 567 aa5.06□□□□□ -1.6
VPS8-212ENST00000452666 PARP2Q9UGN5 583 aa5.06□□□□□ -1.6
VPS8-212ENST00000452666 DIS3Q9Y2L1 958 aaKnown RBP5.06□□□□□ -1.6
VPS8-212ENST00000452666 A0A087WZG4 1122 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 LOC105371045A0A1W2PR82 267 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 STXBP3O00186 592 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 GREM1O60565 184 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 PAMP19021 973 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 MRPL58Q14197 206 aaKnown RBP5.05□□□□□ -1.6
VPS8-212ENST00000452666 CCDC142Q17RM4 750 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 MILR1Q7Z6M3 343 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 RALYLQ86SE5 291 aaKnown RBP5.05□□□□□ -1.6
VPS8-212ENST00000452666 C1orf210Q8IVY1 113 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 PLEKHG4BQ96PX9 1271 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 ADAM29Q9UKF5 820 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 CROTQ9UKG9 612 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 ZNF451Q9Y4E5 1061 aa5.05□□□□□ -1.6
VPS8-212ENST00000452666 NPHP3-ACAD11A0A0J9YXS1 232 aa5.04□□□□□ -1.6
VPS8-212ENST00000452666 C7orf72A4D263 438 aa5.04□□□□□ -1.6
VPS8-212ENST00000452666 PLSCR1O15162 318 aa5.04□□□□□ -1.6
VPS8-212ENST00000452666 IGSF3O75054 1194 aa5.04□□□□□ -1.6
VPS8-212ENST00000452666 RECKO95980 971 aa5.04□□□□□ -1.6
VPS8-212ENST00000452666 C1SP09871 688 aa5.04□□□□□ -1.6
VPS8-212ENST00000452666 MAKP20794 623 aa5.04□□□□□ -1.6
VPS8-212ENST00000452666 MCM4P33991 863 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms