RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CLEC10AQ8IUN9 316 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 REXO1Q8N1G1 1221 aaKnown RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 CPA6Q8N4T0 437 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 OTUD6BQ8N6M0 293 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 JARID2Q92833 1246 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 KISS1RQ969F8 398 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 GCC1Q96CN9 775 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 MRPL4Q9BYD3 311 aaKnown RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 PDGFDQ9GZP0 370 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 IFT22Q9H7X7 185 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 TCF7L1Q9HCS4 588 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 BRMS1Q9HCU9 246 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 BLOC1S4Q9NUP1 217 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 TMEM39AQ9NV64 488 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 RRN3Q9NYV6 651 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 SUCOQ9UBS9 1254 aaKnown RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 FBXO10Q9UK96 956 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 TPCN1Q9ULQ1 816 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 TMCC3Q9ULS5 477 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 MAGED1Q9Y5V3 778 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 LRRFIP2Q9Y608 721 aaKnown RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 SMTNL1A8MU46 457 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 AGRPO00253 132 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 NEMP1O14524 444 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 TLR5O60602 858 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 VAMP4O75379 141 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 MT-CO1P00395 513 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 ASGR2P07307 311 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 MAP4P27816 1152 aaKnown RBP5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 RXRBP28702 533 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 DEKP35659 375 aaKnown RBP5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 KRT20P35900 424 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 FLT3P36888 993 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 RECQLP46063 649 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 STT3AP46977 705 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 ALDH5A1P51649 535 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 ZNF131P52739 623 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 GRB10Q13322 594 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 MPP2Q14168 576 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 NCAPHQ15003 741 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 AGMOQ6ZNB7 445 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 UBE2Q1Q7Z7E8 422 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 CATIPQ7Z7H3 387 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 SLC51AQ86UW1 340 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 TBC1D20Q96BZ9 403 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 FUBP3Q96I24 572 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 NELL2Q99435 816 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 FAM83CQ9BQN1 747 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 DBNDD2Q9BQY9 259 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 CRB3Q9BUF7 120 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 WDR18Q9BV38 432 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 NAA15Q9BXJ9 866 aaKnown RBP5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 CEP44Q9C0F1 390 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 EPN3Q9H201 632 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 RAD18Q9NS91 495 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 AP4E1Q9UPM8 1137 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 CEP131Q9UPN4 1083 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 APOBEC2Q9Y235 224 aaKnown RBP5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 ZNF652Q9Y2D9 606 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 ACTL7BQ9Y614 415 aa5.2□□□□□ -1.58
HMGB3P21-201ENST00000452483 TRBV23-1A0A0A0MS06 115 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 GTPBP10A4D1E9 387 aaKnown RBP5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 UPK3BL1B0FP48 263 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 UPK3BL2E5RIL1 263 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 SUSD5O60279 629 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 OPA1O60313 960 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 AOC2O75106 756 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 DNAJC8O75937 253 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 LTFP02788 710 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 GSTP1P09211 210 aaKnown RBP5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 CAPN3P20807 821 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 GRK6P43250 576 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 ID4P47928 161 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 USP11P51784 963 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 SNX16P57768 344 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 PSMC1P62191 440 aaKnown RBP5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 HNRNPUQ00839 825 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 GRM1Q13255 1194 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 LRP8Q14114 963 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 SEPT7Q16181 437 aaKnown RBP5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 TUBB8Q3ZCM7 444 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 VPS53Q5VIR6 699 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 DUSP27Q5VZP5 1158 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 RNF43Q68DV7 783 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 IQSEC1Q6DN90 963 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 VHLLQ6RSH7 139 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 C4orf50Q6ZRC1 276 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 PDZD3Q86UT5 571 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 SLC41A1Q8IVJ1 513 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 SULF2Q8IWU5 870 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 NKAIN3Q8N8D7 197 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 FLCNQ8NFG4 579 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 GATAD2BQ8WXI9 593 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 ZBTB10Q96DT7 871 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 CCDC138Q96M89 665 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 AIFM3Q96NN9 605 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 NUDT16L1Q9BRJ7 211 aaKnown RBP5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 MENTQ9BUN1 341 aa5.19□□□□□ -1.58
HMGB3P21-201ENST00000452483 YIPF2Q9BWQ6 316 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms