RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 KATNBL1Q9H079 304 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 VTA1Q9NP79 307 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 RBM19Q9Y4C8 960 aaKnown RBP13.58□□□□□ -0.24
LINC00339-205ENST00000452322 DDX49Q9Y6V7 483 aaKnown RBP13.58□□□□□ -0.24
LINC00339-205ENST00000452322 MYCLP12524 364 aaPredicted RBP13.57□□□□□ -0.24
LINC00339-205ENST00000452322 CYBAP13498 195 aa13.57□□□□□ -0.24
LINC00339-205ENST00000452322 PDIA4P13667 645 aaKnown RBP13.57□□□□□ -0.24
LINC00339-205ENST00000452322 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
LINC00339-205ENST00000452322 MRPS9P82933 396 aaKnown RBP13.57□□□□□ -0.24
LINC00339-205ENST00000452322 TRIM32Q13049 653 aa13.57□□□□□ -0.24
LINC00339-205ENST00000452322 ACVR2BQ13705 512 aa13.57□□□□□ -0.24
LINC00339-205ENST00000452322 FBXO16Q8IX29 292 aaPredicted RBP13.57□□□□□ -0.24
LINC00339-205ENST00000452322 TBCKQ8TEA7 893 aa13.57□□□□□ -0.24
LINC00339-205ENST00000452322 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
LINC00339-205ENST00000452322 ZHX1Q9UKY1 873 aaPredicted RBP13.57□□□□□ -0.24
LINC00339-205ENST00000452322 MYH7BA7E2Y1 1941 aa13.56□□□□□ -0.24
LINC00339-205ENST00000452322 CYP3A4P08684 503 aa13.56□□□□□ -0.24
LINC00339-205ENST00000452322 ZNF865P0CJ78 1059 aaPredicted RBP13.56□□□□□ -0.24
LINC00339-205ENST00000452322 U2AF2P26368 475 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00339-205ENST00000452322 GNL2Q13823 731 aaKnown RBP13.56□□□□□ -0.24
LINC00339-205ENST00000452322 PIK3AP1Q6ZUJ8 805 aa13.56□□□□□ -0.24
LINC00339-205ENST00000452322 EEPD1Q7L9B9 569 aa13.56□□□□□ -0.24
LINC00339-205ENST00000452322 NOSTRINQ8IVI9 506 aa13.56□□□□□ -0.24
LINC00339-205ENST00000452322 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
LINC00339-205ENST00000452322 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
LINC00339-205ENST00000452322 BRCA2P51587 3418 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 KIAA1217Q5T5P2 1943 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 RBM47A0AV96 593 aaKnown RBP13.55□□□□□ -0.24
LINC00339-205ENST00000452322 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
LINC00339-205ENST00000452322 KIF28PB7ZC32 967 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 STX6O43752 255 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 CIITAP33076 1130 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 USP11P51784 963 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 INF2Q27J81 1249 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 GNPTABQ3T906 1256 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
LINC00339-205ENST00000452322 PRAMEF19Q5SWL8 479 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 TAPT1Q6NXT6 567 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 NEK8Q86SG6 692 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 TRPV1Q8NER1 839 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 ZNF333Q96JL9 665 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 UBIAD1Q9Y5Z9 338 aa13.55□□□□□ -0.24
LINC00339-205ENST00000452322 FAM205CA6NFA0 338 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 SEPT4O43236 478 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 RGS20O76081 388 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 AKR1A1P14550 325 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 ITGB5P18084 799 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-205ENST00000452322 CEP55Q53EZ4 464 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 COL13A1Q5TAT6 717 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-205ENST00000452322 MOXD1Q6UVY6 613 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 NLRX1Q86UT6 975 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 SCFD2Q8WU76 684 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 GPRASP2Q96D09 838 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 MXRA8Q9BRK3 442 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 HMX1Q9NP08 348 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-205ENST00000452322 JADE2Q9NQC1 790 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 RTEL1Q9NZ71 1219 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-205ENST00000452322 MTMR6Q9Y217 621 aa13.54□□□□□ -0.24
LINC00339-205ENST00000452322 FAM86B1E9PN63 330 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 MAFGO15525 162 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 FIBPO43427 364 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 EDIL3O43854 480 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 FAM86B2P0C5J1 330 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 ICAM3P32942 547 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 ZNF76P36508 570 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 TRAPPC10P48553 1259 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 SETQ01105 290 aaPredicted RBP13.53□□□□□ -0.24
LINC00339-205ENST00000452322 TTLL4Q14679 1199 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 CCDC144BQ3MJ40 725 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 IQSEC1Q6DN90 963 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 KCNV1Q6PIU1 500 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 SEPT14Q6ZU15 432 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 NIPA1Q7RTP0 329 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 ZFP91Q96JP5 570 aaPredicted RBP13.53□□□□□ -0.24
LINC00339-205ENST00000452322 CDHR1Q96JP9 859 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 NAP1L4Q99733 375 aaKnown RBP13.53□□□□□ -0.24
LINC00339-205ENST00000452322 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00339-205ENST00000452322 PDGFCQ9NRA1 345 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
LINC00339-205ENST00000452322 IGLV3-22A0A075B6J6 115 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 CYP3A7-CYP3A51PA0A087WV96 503 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 MEIS1O00470 390 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 MSCO60682 206 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 TGFB3P10600 412 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 GCFC2P16383 781 aaKnown RBP13.52□□□□□ -0.25
LINC00339-205ENST00000452322 CYP3A7P24462 503 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 CNGA1P29973 690 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 ADCYAP1R1P41586 468 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 MTMR1Q13613 665 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 MTFR1Q15390 333 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 LETM2Q2VYF4 491 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 PPP4R3AQ6IN85 833 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 CCDC62Q6P9F0 684 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 BRAPQ7Z569 592 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 MBOAT7Q96N66 472 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 WDR11Q9BZH6 1224 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 UNC93B1Q9H1C4 597 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms