RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 Q9Y3F1 56 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 BRWD1Q9NSI6 2320 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 COL4A4P53420 1690 aaPredicted RBP11.91□□□□□ -0.5
LINC01004-202ENST00000450686 B4E1Z4 1266 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 TNFRSF10AO00220 468 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 KDM4AO75164 1064 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 SNHG28P0DPA3 235 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 EDNRBP24530 442 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 CDC37Q16543 378 aaPredicted RBP11.91□□□□□ -0.5
LINC01004-202ENST00000450686 LY6KQ17RY6 165 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 TCTN1Q2MV58 587 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 CWC27Q6UX04 472 aaKnown RBP11.91□□□□□ -0.5
LINC01004-202ENST00000450686 AFG1LQ8WV93 481 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 SYMPKQ92797 1274 aaKnown RBP11.91□□□□□ -0.5
LINC01004-202ENST00000450686 TAAR1Q96RJ0 339 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 MTIF3Q9H2K0 278 aaKnown RBP11.91□□□□□ -0.5
LINC01004-202ENST00000450686 VAT1LQ9HCJ6 419 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
LINC01004-202ENST00000450686 MYH7BA7E2Y1 1941 aa11.91□□□□□ -0.5
LINC01004-202ENST00000450686 BAZ2BQ9UIF8 2168 aaKnown RBP11.91□□□□□ -0.5
LINC01004-202ENST00000450686 IGHDP01880 384 aa11.9□□□□□ -0.5
LINC01004-202ENST00000450686 SDSP20132 328 aa11.9□□□□□ -0.5
LINC01004-202ENST00000450686 KCNQ1P51787 676 aa11.9□□□□□ -0.5
LINC01004-202ENST00000450686 HDAC1Q13547 482 aaPredicted RBP11.9□□□□□ -0.5
LINC01004-202ENST00000450686 RPUSD2Q8IZ73 545 aaKnown RBP11.9□□□□□ -0.5
LINC01004-202ENST00000450686 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
LINC01004-202ENST00000450686 SYTL5Q8TDW5 730 aaPredicted RBP11.9□□□□□ -0.5
LINC01004-202ENST00000450686 SCFD2Q8WU76 684 aa11.9□□□□□ -0.5
LINC01004-202ENST00000450686 YTHDC1Q96MU7 727 aaKnown RBP11.9□□□□□ -0.5
LINC01004-202ENST00000450686 ASB2Q96Q27 587 aa11.9□□□□□ -0.5
LINC01004-202ENST00000450686 CTAGE1Q96RT6 745 aa11.9□□□□□ -0.5
LINC01004-202ENST00000450686 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01004-202ENST00000450686 IL25Q9H293 177 aa11.9□□□□□ -0.5
LINC01004-202ENST00000450686 SCUBE2Q9NQ36 999 aa11.9□□□□□ -0.5
LINC01004-202ENST00000450686 ZMYM6O95789 1325 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 WDR19Q8NEZ3 1342 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 A6NJR5 290 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 DHX16O60231 1041 aaKnown RBP11.89□□□□□ -0.51
LINC01004-202ENST00000450686 MMP3P08254 477 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 IQCF3P0C7M6 154 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 ZNF286BP0CG31 522 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 EIF2AK2P19525 551 aaKnown RBP11.89□□□□□ -0.51
LINC01004-202ENST00000450686 ARHGAP1Q07960 439 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 GPNMBQ14956 572 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
LINC01004-202ENST00000450686 QRICH1Q2TAL8 776 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 GDF6Q6KF10 455 aaPredicted RBP11.89□□□□□ -0.51
LINC01004-202ENST00000450686 CCDC62Q6P9F0 684 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 PLEKHM2Q8IWE5 1019 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 ADGRF4Q8IZF3 695 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 ARNTL2Q8WYA1 636 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 DHX38Q92620 1227 aaKnown RBP11.89□□□□□ -0.51
LINC01004-202ENST00000450686 KAT2BQ92831 832 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 UHRF1Q96T88 793 aaPredicted RBP11.89□□□□□ -0.51
LINC01004-202ENST00000450686 PCDHA11Q9Y5I1 949 aa11.89□□□□□ -0.51
LINC01004-202ENST00000450686 ZNF213O14771 459 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 SUPT20HL2P0C7V6 817 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 MRPS5P82675 430 aaKnown RBP11.88□□□□□ -0.51
LINC01004-202ENST00000450686 TAP1Q03518 808 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 PTGISQ16647 500 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 TMEM67Q5HYA8 995 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 ENAHQ8N8S7 591 aaPredicted RBP11.88□□□□□ -0.51
LINC01004-202ENST00000450686 ESR2Q92731 530 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 WNT8BQ93098 351 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 ALG1Q9BT22 464 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 KAT14Q9H8E8 782 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 NOD1Q9Y239 953 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 DOCK5Q9H7D0 1870 aa11.88□□□□□ -0.51
LINC01004-202ENST00000450686 RAD50Q92878 1312 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 OPLAHO14841 1288 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 PPP1R11O60927 126 aaPredicted RBP11.87□□□□□ -0.51
LINC01004-202ENST00000450686 COL9A1P20849 921 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 DEFB103AP81534 67 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
LINC01004-202ENST00000450686 HIC1Q14526 733 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 HERC6Q8IVU3 1022 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 RETREG2Q8NC44 543 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 DNERQ8NFT8 737 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 IL31RAQ8NI17 732 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 EXOC6Q8TAG9 804 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 ATXN2LQ8WWM7 1075 aaKnown RBP11.87□□□□□ -0.51
LINC01004-202ENST00000450686 TTC14Q96N46 770 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 ZSCAN10Q96SZ4 725 aaPredicted RBP11.87□□□□□ -0.51
LINC01004-202ENST00000450686 RMDN3Q96TC7 470 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 JMJD4Q9H9V9 463 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 ZSWIM5Q9P217 1185 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 MTUS1Q9ULD2 1270 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 MTCH2Q9Y6C9 303 aa11.87□□□□□ -0.51
LINC01004-202ENST00000450686 NKRFO15226 690 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■□□□□ 10.8
LINC01004-202ENST00000450686 CFBP00751 764 aa11.86□□□□□ -0.51
LINC01004-202ENST00000450686 GH1P01241 217 aa11.86□□□□□ -0.51
LINC01004-202ENST00000450686 HOXA13P31271 388 aaPredicted RBP11.86□□□□□ -0.51
LINC01004-202ENST00000450686 SLC35G1Q2M3R5 365 aa11.86□□□□□ -0.51
LINC01004-202ENST00000450686 BRDTQ58F21 947 aaPredicted RBP11.86□□□□□ -0.51
LINC01004-202ENST00000450686 GPATCH4Q5T3I0 446 aaKnown RBP11.86□□□□□ -0.51
LINC01004-202ENST00000450686 FAM117BQ6P1L5 589 aa11.86□□□□□ -0.51
LINC01004-202ENST00000450686 CYB5R4Q7L1T6 521 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms