RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 MTCH2Q9Y6C9 303 aa20.38■□□□□ 0.85
FAM3A-216ENST00000449971 ABCB11O95342 1321 aa20.37■□□□□ 0.85
FAM3A-216ENST00000449971 PALM3A6NDB9 673 aaPredicted RBP20.37■□□□□ 0.85
FAM3A-216ENST00000449971 PRC1O43663 620 aa20.37■□□□□ 0.85
FAM3A-216ENST00000449971 ALDH5A1P51649 535 aaPredicted RBP20.37■□□□□ 0.85
FAM3A-216ENST00000449971 CHMP4BP1P59074 171 aa20.37■□□□□ 0.85
FAM3A-216ENST00000449971 RPS6P62753 249 aaKnown RBP20.37■□□□□ 0.85
FAM3A-216ENST00000449971 GRM4Q14833 912 aa20.37■□□□□ 0.85
FAM3A-216ENST00000449971 CATIPQ7Z7H3 387 aa20.37■□□□□ 0.85
FAM3A-216ENST00000449971 FTOQ9C0B1 505 aaKnown RBP eCLIP20.37■□□□□ 0.85
FAM3A-216ENST00000449971 MCM5P33992 734 aa20.36■□□□□ 0.85
FAM3A-216ENST00000449971 RGS22Q8NE09 1264 aa20.36■□□□□ 0.85
FAM3A-216ENST00000449971 GPHNQ9NQX3 736 aaPredicted RBP20.36■□□□□ 0.85
FAM3A-216ENST00000449971 ACTN1P12814 892 aa20.35■□□□□ 0.85
FAM3A-216ENST00000449971 RNF20Q5VTR2 975 aa20.35■□□□□ 0.85
FAM3A-216ENST00000449971 NFXL1Q6ZNB6 911 aa20.35■□□□□ 0.85
FAM3A-216ENST00000449971 MCF2L2Q86YR7 1114 aa20.35■□□□□ 0.85
FAM3A-216ENST00000449971 MORC4Q8TE76 937 aa20.35■□□□□ 0.85
FAM3A-216ENST00000449971 TBC1D5Q92609 795 aa20.35■□□□□ 0.85
FAM3A-216ENST00000449971 AMNQ9BXJ7 453 aa20.35■□□□□ 0.85
FAM3A-216ENST00000449971 MRPL11Q9Y3B7 192 aaKnown RBP20.35■□□□□ 0.85
FAM3A-216ENST00000449971 HCN4Q9Y3Q4 1203 aa20.35■□□□□ 0.85
FAM3A-216ENST00000449971 TRANK1O15050 2925 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 SCN5AQ14524 2016 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 ARHGEF15O94989 841 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 PFKMP08237 780 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 SUPT20HL2P0C7V6 817 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 TROAPQ12815 778 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 OR6J1Q8NGC5 347 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 MPHOSPH6Q99547 160 aaKnown RBP20.34■□□□□ 0.85
FAM3A-216ENST00000449971 LRFN3Q9BTN0 628 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 SEZ6LQ9BYH1 1024 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 WDR11Q9BZH6 1224 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 LY9Q9HBG7 655 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 VTA1Q9NP79 307 aa20.34■□□□□ 0.85
FAM3A-216ENST00000449971 LRRC37A2A6NM11 1700 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 LOC102724159A0A0B4J2E5 919 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 FAM86C2PA6NEL3 165 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 ZBTB5O15062 677 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 PDE4DQ08499 809 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 PWP2Q15269 919 aaKnown RBP20.33■□□□□ 0.85
FAM3A-216ENST00000449971 HOMER1Q86YM7 354 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 TMTC2Q8N394 836 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 DNERQ8NFT8 737 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 TMEM87BQ96K49 555 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 MTA3Q9BTC8 594 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 POLR3EQ9NVU0 708 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 Q9Y3F1 56 aa20.33■□□□□ 0.85
FAM3A-216ENST00000449971 CCDC69A6NI79 296 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 B4DLN1 442 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 MRPL12P52815 198 aaKnown RBP20.32■□□□□ 0.84
FAM3A-216ENST00000449971 PURAQ00577 322 aaKnown RBP20.32■□□□□ 0.84
FAM3A-216ENST00000449971 TAP1Q03518 808 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 COL9A3Q14050 684 aaPredicted RBP20.32■□□□□ 0.84
FAM3A-216ENST00000449971 DUSP28Q4G0W2 176 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 SPRED2Q7Z698 418 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 ZNF654Q8IZM8 581 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 RETREG2Q8NC44 543 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 MTMR8Q96EF0 704 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 PIGSQ96S52 555 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 MTG1Q9BT17 334 aaPredicted RBP20.32■□□□□ 0.84
FAM3A-216ENST00000449971 MYL10Q9BUA6 226 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 MAF1Q9H063 256 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 RIOX1Q9H6W3 641 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 PCDHA1Q9Y5I3 950 aa20.32■□□□□ 0.84
FAM3A-216ENST00000449971 KIF28PB7ZC32 967 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 SH2B2O14492 632 aaPredicted RBP20.31■□□□□ 0.84
FAM3A-216ENST00000449971 PPP1R11O60927 126 aaPredicted RBP20.31■□□□□ 0.84
FAM3A-216ENST00000449971 CPT1AP50416 773 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 SLC35G1Q2M3R5 365 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 NBPF20Q3BBV1 942 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 TMEM31Q5JXX7 168 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 CTCFLQ8NI51 663 aaPredicted RBP20.31■□□□□ 0.84
FAM3A-216ENST00000449971 SYTL5Q8TDW5 730 aaPredicted RBP20.31■□□□□ 0.84
FAM3A-216ENST00000449971 PIBF1Q8WXW3 757 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 HLA-CQ95604 372 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 TAAR1Q96RJ0 339 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 SLC9A7Q96T83 725 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 LRRC2Q9BYS8 371 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 COG5Q9UP83 839 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 NOD1Q9Y239 953 aa20.31■□□□□ 0.84
FAM3A-216ENST00000449971 DDAH1O94760 285 aa20.3■□□□□ 0.84
FAM3A-216ENST00000449971 CFBP00751 764 aa20.3■□□□□ 0.84
FAM3A-216ENST00000449971 HOXD11P31277 338 aaPredicted RBP20.3■□□□□ 0.84
FAM3A-216ENST00000449971 KIF5BP33176 963 aa20.3■□□□□ 0.84
FAM3A-216ENST00000449971 GRB10Q13322 594 aa20.3■□□□□ 0.84
FAM3A-216ENST00000449971 HERC6Q8IVU3 1022 aa20.3■□□□□ 0.84
FAM3A-216ENST00000449971 NEK1Q96PY6 1258 aa20.3■□□□□ 0.84
FAM3A-216ENST00000449971 PPP4R2Q9NY27 417 aa20.3■□□□□ 0.84
FAM3A-216ENST00000449971 PNMA6FA0A0J9YX94 578 aa20.29■□□□□ 0.84
FAM3A-216ENST00000449971 CYTH3O43739 400 aa20.29■□□□□ 0.84
FAM3A-216ENST00000449971 TLL1O43897 1013 aa20.29■□□□□ 0.84
FAM3A-216ENST00000449971 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
FAM3A-216ENST00000449971 IQCF3P0C7M6 154 aa20.29■□□□□ 0.84
FAM3A-216ENST00000449971 EDNRBP24530 442 aa20.29■□□□□ 0.84
FAM3A-216ENST00000449971 LIFRP42702 1097 aa20.29■□□□□ 0.84
FAM3A-216ENST00000449971 TRAF1Q13077 416 aa20.29■□□□□ 0.84
FAM3A-216ENST00000449971 TMCO2Q7Z6W1 182 aaPredicted RBP20.29■□□□□ 0.84
FAM3A-216ENST00000449971 NSUN6Q8TEA1 469 aaKnown RBP20.29■□□□□ 0.84
FAM3A-216ENST00000449971 COPS5Q92905 334 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms