RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 SUPT20HQ8NEM7 779 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 BCAS4Q8TDM0 211 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 CCDC127Q96BQ5 260 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 FUCA2Q9BTY2 467 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 PPANQ9NQ55 473 aaKnown RBP7.85□□□□□ -1.15
BEST1-202ENST00000449131 UTYO14607 1347 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 SALL3Q9BXA9 1300 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 COL3A1P02461 1466 aaPredicted RBP7.85□□□□□ -1.15
BEST1-202ENST00000449131 FER1L4A9Z1Z3 1794 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 K7ENM7 598 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 DKC1O60832 514 aaKnown RBP eCLIP7.85□□□□□ -1.15
BEST1-202ENST00000449131 CTNNA1P35221 906 aaKnown RBP7.85□□□□□ -1.15
BEST1-202ENST00000449131 ODR4Q5SWX8 454 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 NLRX1Q86UT6 975 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 METTL16Q86W50 562 aaKnown RBP7.85□□□□□ -1.15
BEST1-202ENST00000449131 MB21D1Q8N884 522 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.85□□□□□ -1.15
BEST1-202ENST00000449131 CABS1Q96KC9 395 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 THAP9Q9H5L6 903 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 NHEJ1Q9H9Q4 299 aaPredicted RBP7.85□□□□□ -1.15
BEST1-202ENST00000449131 RIC8AQ9NPQ8 531 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
BEST1-202ENST00000449131 MRPL11Q9Y3B7 192 aaKnown RBP7.85□□□□□ -1.15
BEST1-202ENST00000449131 DIP2AQ14689 1571 aa7.85□□□□□ -1.15
BEST1-202ENST00000449131 CEP170BQ9Y4F5 1589 aaPredicted RBP7.84□□□□□ -1.15
BEST1-202ENST00000449131 TRIM66O15016 1216 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 CLIC2O15247 247 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 RPS6KA4O75676 772 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 TNNI1P19237 187 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 PRCPP42785 496 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 TRPC3Q13507 836 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 NLGN1Q8N2Q7 840 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 FAM71BQ8TC56 605 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 IGDCC4Q8TDY8 1250 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 FAM84BQ96KN1 310 aaPredicted RBP7.84□□□□□ -1.15
BEST1-202ENST00000449131 MTA3Q9BTC8 594 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 NDST4Q9H3R1 872 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 MED4Q9NPJ6 270 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 SWAP70Q9UH65 585 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 C1orf167Q5SNV9 1468 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 CLRN2A0PK11 232 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 PP2D1A8MPX8 630 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 E7EVH7 732 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 ATP8B1O43520 1251 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 KCNQ2O43526 872 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 MOCS3O95396 460 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 TFRCP02786 760 aaKnown RBP7.84□□□□□ -1.15
BEST1-202ENST00000449131 GCFC2P16383 781 aaKnown RBP7.84□□□□□ -1.15
BEST1-202ENST00000449131 UAP1Q16222 522 aaPredicted RBP7.84□□□□□ -1.15
BEST1-202ENST00000449131 XKR9Q5GH70 373 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 FAM102BQ5T8I3 360 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 TBC1D9BQ66K14 1250 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 SMIM5Q71RC9 77 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 MSANTD4Q8NCY6 345 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 ANKRD7Q92527 254 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 KRT12Q99456 494 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 PLA2G12BQ9BX93 195 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 KANSL2Q9H9L4 492 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 TMOD4Q9NZQ9 345 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 AGTPBP1Q9UPW5 1226 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 CSF1RP07333 972 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 CD19P15391 556 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 C2orf54Q08AI8 447 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 LRCH2Q5VUJ6 765 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 DCUN1D2Q6PH85 259 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 NIM1KQ8IY84 436 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 PPM1KQ8N3J5 372 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 CCDC63Q8NA47 563 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 RAB17Q9H0T7 212 aa7.84□□□□□ -1.15
BEST1-202ENST00000449131 RRP15Q9Y3B9 282 aaKnown RBP7.84□□□□□ -1.15
BEST1-202ENST00000449131 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.84□□□□□ -1.15
BEST1-202ENST00000449131 TRIM37O94972 964 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 POLD1P28340 1107 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 MXRA7P84157 204 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 FMR1Q06787 632 aaKnown RBP eCLIP7.83□□□□□ -1.16
BEST1-202ENST00000449131 MTMR3Q13615 1198 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 CCDC6Q16204 474 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 CC2D1AQ6P1N0 951 aaPredicted RBP7.83□□□□□ -1.16
BEST1-202ENST00000449131 CSRNP1Q96S65 589 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 TEKT3Q9BXF9 490 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 EMILIN3Q9NT22 766 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 UBR1Q8IWV7 1749 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 USP17L5A8MUK1 530 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 SORBS3O60504 671 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 FTCDO95954 541 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 RCAN1P53805 252 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 TBC1D10BQ4KMP7 808 aaPredicted RBP7.83□□□□□ -1.16
BEST1-202ENST00000449131 C6orf163Q5TEZ5 329 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 CCDC170Q8IYT3 715 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 FAM133AQ8N9E0 248 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 RIN2Q8WYP3 895 aaPredicted RBP7.83□□□□□ -1.16
BEST1-202ENST00000449131 IWS1Q96ST2 819 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 NARFQ9UHQ1 456 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 GINS2Q9Y248 185 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 MORC2Q9Y6X9 1032 aaPredicted RBP7.83□□□□□ -1.16
BEST1-202ENST00000449131 C3P01024 1663 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 COL15A1P39059 1388 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 POTEMA6NI47 508 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 RNF40O75150 1001 aa7.83□□□□□ -1.16
BEST1-202ENST00000449131 PLA2G4BP0C869 781 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms