RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 UBE2SQ16763 222 aa20.23■□□□□ 0.83
HLCS-205ENST00000448340 LRRC26Q2I0M4 334 aa20.23■□□□□ 0.83
HLCS-205ENST00000448340 ARHGEF16Q5VV41 709 aa20.23■□□□□ 0.83
HLCS-205ENST00000448340 MCTP2Q6DN12 878 aa20.23■□□□□ 0.83
HLCS-205ENST00000448340 ARMCX2Q7L311 632 aa20.23■□□□□ 0.83
HLCS-205ENST00000448340 PXMP2Q9NR77 195 aa20.23■□□□□ 0.83
HLCS-205ENST00000448340 PCDHA4Q9UN74 947 aa20.23■□□□□ 0.83
HLCS-205ENST00000448340 KIF3AQ9Y496 699 aa20.23■□□□□ 0.83
HLCS-205ENST00000448340 SPDYE3A6NKU9 549 aa20.22■□□□□ 0.83
HLCS-205ENST00000448340 SNAI1O95863 264 aaPredicted RBP20.22■□□□□ 0.83
HLCS-205ENST00000448340 EDNRBP24530 442 aa20.22■□□□□ 0.83
HLCS-205ENST00000448340 AP3B2Q13367 1082 aa20.22■□□□□ 0.83
HLCS-205ENST00000448340 REXO1Q8N1G1 1221 aaKnown RBP20.22■□□□□ 0.83
HLCS-205ENST00000448340 DAGLBQ8NCG7 672 aa20.22■□□□□ 0.83
HLCS-205ENST00000448340 INTS4Q96HW7 963 aaKnown RBP20.22■□□□□ 0.83
HLCS-205ENST00000448340 PHF20Q9BVI0 1012 aa20.22■□□□□ 0.83
HLCS-205ENST00000448340 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.22■□□□□ 0.83
HLCS-205ENST00000448340 NRBP1Q9UHY1 535 aa20.22■□□□□ 0.83
HLCS-205ENST00000448340 SMC3Q9UQE7 1217 aa20.22■□□□□ 0.83
HLCS-205ENST00000448340 MCM3APO60318 1980 aa20.22■□□□□ 0.83
HLCS-205ENST00000448340 FRMPD4Q14CM0 1322 aa20.22■□□□□ 0.83
HLCS-205ENST00000448340 EIF2AK2P19525 551 aaKnown RBP20.21■□□□□ 0.83
HLCS-205ENST00000448340 TRIM29Q14134 588 aa20.21■□□□□ 0.83
HLCS-205ENST00000448340 PDCD2LQ9BRP1 358 aa20.21■□□□□ 0.83
HLCS-205ENST00000448340 ABHD16BQ9H3Z7 469 aa20.21■□□□□ 0.83
HLCS-205ENST00000448340 GJB4Q9NTQ9 266 aa20.21■□□□□ 0.83
HLCS-205ENST00000448340 PCDHA6Q9UN73 950 aa20.21■□□□□ 0.83
HLCS-205ENST00000448340 KCNJ14Q9UNX9 436 aa20.21■□□□□ 0.83
HLCS-205ENST00000448340 CNPY2Q9Y2B0 182 aa20.21■□□□□ 0.83
HLCS-205ENST00000448340 PCDHA8Q9Y5H6 950 aa20.21■□□□□ 0.83
HLCS-205ENST00000448340 NR3C2P08235 984 aa20.2■□□□□ 0.82
HLCS-205ENST00000448340 PDE4DQ08499 809 aa20.2■□□□□ 0.82
HLCS-205ENST00000448340 NPY5RQ15761 445 aa20.2■□□□□ 0.82
HLCS-205ENST00000448340 BLIDQ8IZY5 108 aa20.2■□□□□ 0.82
HLCS-205ENST00000448340 EHMT1Q9H9B1 1298 aa20.2■□□□□ 0.82
HLCS-205ENST00000448340 CYBAP13498 195 aa20.19■□□□□ 0.82
HLCS-205ENST00000448340 GJB2P29033 226 aa20.19■□□□□ 0.82
HLCS-205ENST00000448340 PGM5Q15124 567 aa20.19■□□□□ 0.82
HLCS-205ENST00000448340 JAKMIP3Q5VZ66 844 aa20.19■□□□□ 0.82
HLCS-205ENST00000448340 VSIG10LQ86VR7 867 aa20.19■□□□□ 0.82
HLCS-205ENST00000448340 C8orf76Q96K31 380 aa20.19■□□□□ 0.82
HLCS-205ENST00000448340 KATNBL1Q9H079 304 aa20.19■□□□□ 0.82
HLCS-205ENST00000448340 TMEM260Q9NX78 707 aa20.19■□□□□ 0.82
HLCS-205ENST00000448340 DDX49Q9Y6V7 483 aaKnown RBP20.19■□□□□ 0.82
HLCS-205ENST00000448340 M0R2N6 131 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 ADAMTS3O15072 1205 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 EIF3JO75822 258 aaKnown RBP20.18■□□□□ 0.82
HLCS-205ENST00000448340 ACVR2BQ13705 512 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 STXBP2Q15833 593 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 PRAMEF19Q5SWL8 479 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 KRT40Q6A162 431 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 FAM109BQ6ICB4 259 aaPredicted RBP20.18■□□□□ 0.82
HLCS-205ENST00000448340 XRRA1Q6P2D8 792 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 TRPV1Q8NER1 839 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 FBXO18Q8NFZ0 1043 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 ANO3Q9BYT9 981 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 BRMS1Q9HCU9 246 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 VTA1Q9NP79 307 aa20.18■□□□□ 0.82
HLCS-205ENST00000448340 LAMA2P24043 3122 aaKnown RBP20.17■□□□□ 0.82
HLCS-205ENST00000448340 MMP1P03956 469 aa20.17■□□□□ 0.82
HLCS-205ENST00000448340 ZNF865P0CJ78 1059 aaPredicted RBP20.17■□□□□ 0.82
HLCS-205ENST00000448340 CCND2P30279 289 aa20.17■□□□□ 0.82
HLCS-205ENST00000448340 MDM2Q00987 491 aaPredicted RBP20.17■□□□□ 0.82
HLCS-205ENST00000448340 IL31RAQ8NI17 732 aa20.17■□□□□ 0.82
HLCS-205ENST00000448340 LRRC37A2A6NM11 1700 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 STAM2O75886 525 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 MYCLP12524 364 aaPredicted RBP20.16■□□□□ 0.82
HLCS-205ENST00000448340 KRT2P35908 639 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 SREBF1P36956 1147 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 FOSBP53539 338 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 SAFBQ15424 915 aaKnown RBP eCLIP20.16■□□□□ 0.82
HLCS-205ENST00000448340 PCNX4Q63HM2 1172 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 EEPD1Q7L9B9 569 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 RASGRP4Q8TDF6 673 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 PGBD1Q96JS3 809 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 GUCD1Q96NT3 240 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 COL25A1Q9BXS0 654 aaPredicted RBP20.16■□□□□ 0.82
HLCS-205ENST00000448340 ZHX1Q9UKY1 873 aaPredicted RBP20.16■□□□□ 0.82
HLCS-205ENST00000448340 VCANP13611 3396 aa20.16■□□□□ 0.82
HLCS-205ENST00000448340 SEPT4O43236 478 aa20.15■□□□□ 0.82
HLCS-205ENST00000448340 MRPS9P82933 396 aaKnown RBP20.15■□□□□ 0.82
HLCS-205ENST00000448340 BECN1Q14457 450 aa20.15■□□□□ 0.82
HLCS-205ENST00000448340 TAPT1Q6NXT6 567 aa20.15■□□□□ 0.82
HLCS-205ENST00000448340 FBXO16Q8IX29 292 aaPredicted RBP20.15■□□□□ 0.82
HLCS-205ENST00000448340 DNAH12Q6ZR08 3092 aa20.14■□□□□ 0.82
HLCS-205ENST00000448340 RBM47A0AV96 593 aaKnown RBP20.14■□□□□ 0.81
HLCS-205ENST00000448340 HSP90AA1P07900 732 aaKnown RBP20.14■□□□□ 0.81
HLCS-205ENST00000448340 CNGA1P29973 690 aa20.14■□□□□ 0.81
HLCS-205ENST00000448340 GUCY1B3Q02153 619 aa20.14■□□□□ 0.81
HLCS-205ENST00000448340 KRT25Q7Z3Z0 450 aa20.14■□□□□ 0.81
HLCS-205ENST00000448340 DIS3L2Q8IYB7 885 aaKnown RBP20.14■□□□□ 0.81
HLCS-205ENST00000448340 OXER1Q8TDS5 423 aa20.14■□□□□ 0.81
HLCS-205ENST00000448340 CRYGNQ8WXF5 182 aa20.14■□□□□ 0.81
HLCS-205ENST00000448340 FAM184BQ9ULE4 1060 aa20.14■□□□□ 0.81
HLCS-205ENST00000448340 KIAA1217Q5T5P2 1943 aa20.14■□□□□ 0.81
HLCS-205ENST00000448340 MSCO60682 206 aa20.13■□□□□ 0.81
HLCS-205ENST00000448340 CYP3A4P08684 503 aa20.13■□□□□ 0.81
HLCS-205ENST00000448340 AKR1A1P14550 325 aa20.13■□□□□ 0.81
HLCS-205ENST00000448340 PDCP20941 246 aa20.13■□□□□ 0.81
HLCS-205ENST00000448340 ARHGAP4P98171 946 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms