RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 NR3C2P08235 984 aa32.9■■■□□ 2.86
CBX4-202ENST00000448310 HSD17B4P51659 736 aa32.9■■■□□ 2.86
CBX4-202ENST00000448310 ADGRE1Q14246 886 aa32.9■■■□□ 2.86
CBX4-202ENST00000448310 SLC35G1Q2M3R5 365 aa32.9■■■□□ 2.86
CBX4-202ENST00000448310 RUFY2Q8WXA3 655 aa32.9■■■□□ 2.86
CBX4-202ENST00000448310 PRDM6Q9NQX0 595 aa32.9■■■□□ 2.86
CBX4-202ENST00000448310 DDX41Q9UJV9 622 aaKnown RBP32.9■■■□□ 2.86
CBX4-202ENST00000448310 ZBTB5O15062 677 aa32.89■■■□□ 2.86
CBX4-202ENST00000448310 PFKMP08237 780 aa32.89■■■□□ 2.86
CBX4-202ENST00000448310 IQCF3P0C7M6 154 aa32.89■■■□□ 2.86
CBX4-202ENST00000448310 HOMER1Q86YM7 354 aa32.89■■■□□ 2.86
CBX4-202ENST00000448310 RETREG2Q8NC44 543 aa32.89■■■□□ 2.86
CBX4-202ENST00000448310 KAT2BQ92831 832 aa32.89■■■□□ 2.86
CBX4-202ENST00000448310 U3KPZ7 1027 aaPredicted RBP32.89■■■□□ 2.86
CBX4-202ENST00000448310 CHD7Q9P2D1 2997 aa32.88■■■□□ 2.85
CBX4-202ENST00000448310 PITPNM1O00562 1244 aa32.88■■■□□ 2.85
CBX4-202ENST00000448310 IFIT3O14879 490 aaKnown RBP32.88■■■□□ 2.85
CBX4-202ENST00000448310 EIF3JO75822 258 aaKnown RBP32.88■■■□□ 2.85
CBX4-202ENST00000448310 ATP2A2P16615 1042 aaKnown RBP32.88■■■□□ 2.85
CBX4-202ENST00000448310 GRM4Q14833 912 aa32.88■■■□□ 2.85
CBX4-202ENST00000448310 PCDHA1Q9Y5I3 950 aa32.88■■■□□ 2.85
CBX4-202ENST00000448310 MRVI1Q9Y6F6 885 aa32.88■■■□□ 2.85
CBX4-202ENST00000448310 SPTBN5Q9NRC6 3674 aaKnown RBP32.87■■■□□ 2.85
CBX4-202ENST00000448310 MYCLP12524 364 aaPredicted RBP32.87■■■□□ 2.85
CBX4-202ENST00000448310 HOXA13P31271 388 aaPredicted RBP32.87■■■□□ 2.85
CBX4-202ENST00000448310 PTGISQ16647 500 aa32.87■■■□□ 2.85
CBX4-202ENST00000448310 CASTP20810 708 aaKnown RBP32.86■■■□□ 2.85
CBX4-202ENST00000448310 IGFBP4P22692 258 aa32.86■■■□□ 2.85
CBX4-202ENST00000448310 RFC2P35250 354 aa32.86■■■□□ 2.85
CBX4-202ENST00000448310 GHRHRQ02643 423 aa32.86■■■□□ 2.85
CBX4-202ENST00000448310 BFSP2Q13515 415 aa32.86■■■□□ 2.85
CBX4-202ENST00000448310 PPP2R2DQ66LE6 453 aa32.86■■■□□ 2.85
CBX4-202ENST00000448310 GDF6Q6KF10 455 aaPredicted RBP32.86■■■□□ 2.85
CBX4-202ENST00000448310 CTAGE1Q96RT6 745 aa32.86■■■□□ 2.85
CBX4-202ENST00000448310 PIGSQ96S52 555 aa32.86■■■□□ 2.85
CBX4-202ENST00000448310 PCDHA11Q9Y5I1 949 aa32.86■■■□□ 2.85
CBX4-202ENST00000448310 STOX1Q6ZVD7 989 aa32.85■■■□□ 2.85
CBX4-202ENST00000448310 RALYLQ86SE5 291 aaKnown RBP32.85■■■□□ 2.85
CBX4-202ENST00000448310 PDCD2LQ9BRP1 358 aa32.85■■■□□ 2.85
CBX4-202ENST00000448310 FTOQ9C0B1 505 aaKnown RBP eCLIP32.85■■■□□ 2.859e-12■■■■■ 29.8
CBX4-202ENST00000448310 E7EWF7 191 aa32.84■■■□□ 2.85
CBX4-202ENST00000448310 SORBS3O60504 671 aa32.84■■■□□ 2.85
CBX4-202ENST00000448310 ACTN1P12814 892 aa32.84■■■□□ 2.85
CBX4-202ENST00000448310 DGKDQ16760 1214 aa32.84■■■□□ 2.85
CBX4-202ENST00000448310 IL31RAQ8NI17 732 aa32.84■■■□□ 2.85
CBX4-202ENST00000448310 ZFP91Q96JP5 570 aaPredicted RBP32.84■■■□□ 2.85
CBX4-202ENST00000448310 TTC28Q96AY4 2481 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 ERICH2A1L162 156 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 SGSM2O43147 1006 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 RGS20O76081 388 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 WTAPQ15007 396 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 CCDC85BQ15834 202 aaPredicted RBP32.83■■■□□ 2.85
CBX4-202ENST00000448310 SESTD1Q86VW0 696 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 NCOA7Q8NI08 942 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 EMID1Q96A84 441 aaPredicted RBP32.83■■■□□ 2.85
CBX4-202ENST00000448310 ALG1Q9BT22 464 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 RIOX1Q9H6W3 641 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 PTPRSQ13332 1948 aa32.83■■■□□ 2.85
CBX4-202ENST00000448310 CYTH3O43739 400 aa32.82■■■□□ 2.84
CBX4-202ENST00000448310 ZNF286BP0CG31 522 aa32.82■■■□□ 2.84
CBX4-202ENST00000448310 DHX37Q8IY37 1157 aaKnown RBP32.82■■■□□ 2.84
CBX4-202ENST00000448310 HDAC6Q9UBN7 1215 aa32.82■■■□□ 2.84
CBX4-202ENST00000448310 PSEN2P49810 448 aa32.81■■■□□ 2.84
CBX4-202ENST00000448310 TROAPQ12815 778 aa32.81■■■□□ 2.84
CBX4-202ENST00000448310 LAMC2Q13753 1193 aa32.81■■■□□ 2.84
CBX4-202ENST00000448310 PGM5Q15124 567 aa32.81■■■□□ 2.84
CBX4-202ENST00000448310 DHX38Q92620 1227 aaKnown RBP32.81■■■□□ 2.84
CBX4-202ENST00000448310 MAP3K20Q9NYL2 800 aaKnown RBP32.81■■■□□ 2.84
CBX4-202ENST00000448310 ANTXR2P58335 489 aa32.8■■■□□ 2.84
CBX4-202ENST00000448310 FCHSD1Q86WN1 690 aa32.8■■■□□ 2.84
CBX4-202ENST00000448310 CCDC155Q8N6L0 562 aa32.8■■■□□ 2.84
CBX4-202ENST00000448310 PPTC7Q8NI37 304 aa32.8■■■□□ 2.84
CBX4-202ENST00000448310 CAGE1Q8TC20 777 aa32.8■■■□□ 2.84
CBX4-202ENST00000448310 GTF2IRD1Q9UHL9 959 aa32.8■■■□□ 2.84
CBX4-202ENST00000448310 RBAK-RBAKDNI3L0D1 243 aa32.79■■■□□ 2.84
CBX4-202ENST00000448310 CA3P07451 260 aa32.79■■■□□ 2.84
CBX4-202ENST00000448310 MFSD10Q14728 455 aa32.79■■■□□ 2.84
CBX4-202ENST00000448310 SART3Q15020 963 aaKnown RBP32.79■■■□□ 2.84
CBX4-202ENST00000448310 TMEM67Q5HYA8 995 aa32.79■■■□□ 2.84
CBX4-202ENST00000448310 VSIG10LQ86VR7 867 aa32.79■■■□□ 2.84
CBX4-202ENST00000448310 C7orf31Q8N865 590 aa32.79■■■□□ 2.84
CBX4-202ENST00000448310 PIBF1Q8WXW3 757 aa32.79■■■□□ 2.84
CBX4-202ENST00000448310 SLC9A7Q96T83 725 aa32.79■■■□□ 2.84
CBX4-202ENST00000448310 GCOM1H8Y6P7 765 aaPredicted RBP32.78■■■□□ 2.84
CBX4-202ENST00000448310 POLR2MP0CAP2 368 aa32.78■■■□□ 2.84
CBX4-202ENST00000448310 KIAA0753Q2KHM9 967 aa32.78■■■□□ 2.84
CBX4-202ENST00000448310 AFAP1L1Q8TED9 768 aa32.78■■■□□ 2.84
CBX4-202ENST00000448310 GPKOWQ92917 476 aaPredicted RBP eCLIP32.78■■■□□ 2.842e-6■■■□□ 16
CBX4-202ENST00000448310 PNMA6FA0A0J9YX94 578 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 GGPS1O95749 300 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 F2P00734 622 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 SP2Q02086 613 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 GPNMBQ14956 572 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 TJAP1Q5JTD0 557 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 MYSM1Q5VVJ2 828 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 MB21D2Q8IYB1 491 aaPredicted RBP32.77■■■□□ 2.84
CBX4-202ENST00000448310 SAMD3Q8N6K7 520 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 KATNAL1Q9BW62 490 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 CERS4Q9HA82 394 aa32.77■■■□□ 2.84
CBX4-202ENST00000448310 DOCK5Q9H7D0 1870 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms