RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 KIF18BQ86Y91 864 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 TP53INP2Q8IXH6 220 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 UBR7Q8N806 425 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 PANK1Q8TE04 598 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 LEO1Q8WVC0 666 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 FBXW5Q969U6 566 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 TRMT2BQ96GJ1 504 aaKnown RBP6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 WNK4Q96J92 1243 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 ORAI3Q9BRQ5 295 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 CELF4Q9BZC1 486 aaKnown RBP6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 BTG4Q9NY30 223 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 MARCH2Q9P0N8 246 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 SAMD15Q9P1V8 674 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 ACSL6Q9UKU0 697 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 KPNA6O60684 536 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 PPP1R11O60927 126 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 HPXP02790 462 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 SRGAP2CP0DJJ0 459 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 POU3F3P20264 500 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 NFKB2Q00653 900 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 PCBP1Q15365 356 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 C16orf59Q7L2K0 433 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 TEX2Q8IWB9 1127 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 LZTR1Q8N653 840 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 MTA3Q9BTC8 594 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 C19orf73Q9NVV2 129 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 IMPACTQ9P2X3 320 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 PPARGC1AQ9UBK2 798 aaKnown RBP6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 X6R8D5 127 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 CCDC66A2RUB6 948 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 NOTOA8MTQ0 251 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 C22orf46C9J442 243 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 CBX4O00257 560 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 FUCA1P04066 466 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 CPEP16870 476 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 FPR2P25090 351 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 ST5P78524 1137 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 LRP8Q14114 963 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 DHCR24Q15392 516 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 MROH9Q5TGP6 573 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 LILRA2Q8N149 483 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 AFAP1L2Q8N4X5 818 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 NUP43Q8NFH3 380 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 PLEKHO2Q8TD55 490 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 USP33Q8TEY7 942 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 KCNJ15Q99712 375 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 EPB41L1Q9H4G0 881 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 SP110Q9HB58 689 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 PDLIM7Q9NR12 457 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 MBNL3Q9NUK0 354 aaKnown RBP6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 MCM8Q9UJA3 840 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 ADAMTS6Q9UKP5 1117 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 ATP8A1Q9Y2Q0 1164 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 COA3Q9Y2R0 106 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 COQ6Q9Y2Z9 468 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 RWDD3Q9Y3V2 267 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 ZCCHC6Q5VYS8 1495 aaKnown RBP6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 M0R2C6 588 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 ADAMTS4O75173 837 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 GLRX3O76003 335 aaKnown RBP6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 RNASE1P07998 156 aaKnown RBP6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 PYGMP11217 842 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 RAC2P15153 192 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 PRKCAP17252 672 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 DNM2P50570 870 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 MVKQ03426 396 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 SNX17Q15036 470 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 SEPT7Q16181 437 aaKnown RBP6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 ZNF792Q3KQV3 632 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 TMEM177Q53S58 311 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 ZMYM1Q5SVZ6 1142 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 WWC2Q6AWC2 1192 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 RIOX2Q8IUF8 465 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 PLCD4Q9BRC7 762 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 JAM3Q9BX67 310 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 CABP5Q9NP86 173 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 CATSPERZQ9NTU4 200 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 MSL3P1P0C860 447 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 SCNN1BP51168 640 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 ERVFC1P60507 584 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 SPIRE1Q08AE8 756 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 CRY1Q16526 586 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 OVCH1Q7RTY7 1134 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 NLRX1Q86UT6 975 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 DDX42Q86XP3 938 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 RPUSD2Q8IZ73 545 aaKnown RBP6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 CHST14Q8NCH0 376 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 OR2W6PQ8NHA6 318 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 MYLIPQ8WY64 445 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 FAM126AQ9BYI3 521 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 CTNND2Q9UQB3 1225 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 A0A1W2PQJ5 194 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 PSPNO60542 156 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 DGKIO75912 1065 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 EYA4O95677 639 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 F2P00734 622 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms