RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 MEIS2O14770 477 aa17.66■□□□□ 0.42
SEC22C-208ENST00000445388 CABYRO75952 493 aa17.66■□□□□ 0.42
SEC22C-208ENST00000445388 ADD1P35611 737 aaKnown RBP17.66■□□□□ 0.42
SEC22C-208ENST00000445388 CPT1AP50416 773 aa17.66■□□□□ 0.42
SEC22C-208ENST00000445388 PURAQ00577 322 aaKnown RBP17.66■□□□□ 0.42
SEC22C-208ENST00000445388 ITGA7Q13683 1181 aa17.66■□□□□ 0.42
SEC22C-208ENST00000445388 SLC43A3Q8NBI5 491 aa17.66■□□□□ 0.42
SEC22C-208ENST00000445388 PPP1R13LQ8WUF5 828 aa17.66■□□□□ 0.42
SEC22C-208ENST00000445388 DDX41Q9UJV9 622 aaKnown RBP17.66■□□□□ 0.42
SEC22C-208ENST00000445388 A0A1W2PPC1 479 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 A6NJR5 290 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 KIAA0355O15063 1070 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
SEC22C-208ENST00000445388 PSMA5P28066 241 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 ARHGAP1Q07960 439 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 HEATR3Q7Z4Q2 680 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 FAM126BQ8IXS8 530 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 SMARCC2Q8TAQ2 1214 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 AFG1LQ8WV93 481 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 POLR3EQ9NVU0 708 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 MRVI1Q9Y6F6 885 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 V9GY48 417 aaPredicted RBP17.65■□□□□ 0.42
SEC22C-208ENST00000445388 LTBP2Q14767 1821 aa17.65■□□□□ 0.42
SEC22C-208ENST00000445388 SOX1O00570 391 aaPredicted RBP17.64■□□□□ 0.41
SEC22C-208ENST00000445388 SORBS3O60504 671 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 GH1P01241 217 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 CCND2P30279 289 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 MRPS9P82933 396 aaKnown RBP17.64■□□□□ 0.41
SEC22C-208ENST00000445388 UBE2SQ16763 222 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 WWC2Q6AWC2 1192 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 RUFY3Q7L099 469 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 TDHQ8IZJ6 230 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 CUL5Q93034 780 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 AGXT2Q9BYV1 514 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 PSTPIP2Q9H939 334 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 ZSWIM6Q9HCJ5 1215 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 MROH7Q68CQ1 1323 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 KIAA1217Q5T5P2 1943 aa17.64■□□□□ 0.41
SEC22C-208ENST00000445388 PIK3CDO00329 1044 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 SLC34A2O95436 690 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 CD4P01730 458 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 RAG1P15918 1043 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 METAP2P50579 478 aaKnown RBP eCLIP17.63■□□□□ 0.41
SEC22C-208ENST00000445388 SP2Q02086 613 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 TYW1BQ6NUM6 668 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 FBXL16Q8N461 479 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 MTG1Q9BT17 334 aaPredicted RBP17.63■□□□□ 0.41
SEC22C-208ENST00000445388 TRPV6Q9H1D0 765 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 RTEL1Q9NZ71 1219 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 TBX21Q9UL17 535 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 FRMPD4Q14CM0 1322 aa17.63■□□□□ 0.41
SEC22C-208ENST00000445388 RANBP2P49792 3224 aaKnown RBP17.62■□□□□ 0.41
SEC22C-208ENST00000445388 MMP3P08254 477 aa17.62■□□□□ 0.41
SEC22C-208ENST00000445388 RCAN1P53805 252 aa17.62■□□□□ 0.41
SEC22C-208ENST00000445388 TOB2Q14106 344 aaPredicted RBP17.62■□□□□ 0.41
SEC22C-208ENST00000445388 BRDTQ58F21 947 aaPredicted RBP17.62■□□□□ 0.41
SEC22C-208ENST00000445388 LARP6Q9BRS8 491 aaKnown RBP17.62■□□□□ 0.41
SEC22C-208ENST00000445388 UPF3BQ9BZI7 483 aaKnown RBP17.62■□□□□ 0.41
SEC22C-208ENST00000445388 BCAS3Q9H6U6 928 aa17.62■□□□□ 0.41
SEC22C-208ENST00000445388 TLR3O15455 904 aaKnown RBP17.61■□□□□ 0.41
SEC22C-208ENST00000445388 B4GALT4O60513 344 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 PPFIA3O75145 1194 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 TIMP1P01033 207 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 EPHB4P54760 987 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 CHMP4BP1P59074 171 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 NBPF20Q3BBV1 942 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 C9orf50Q5SZB4 431 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 DHX37Q8IY37 1157 aaKnown RBP17.61■□□□□ 0.41
SEC22C-208ENST00000445388 LRCH3Q96II8 777 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 PPP1R12CQ9BZL4 782 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 CYP46A1Q9Y6A2 500 aa17.61■□□□□ 0.41
SEC22C-208ENST00000445388 STXBP3O00186 592 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 KPNA6O60684 536 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 GGPS1O95749 300 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 PDIA3P30101 505 aaKnown RBP17.6■□□□□ 0.41
SEC22C-208ENST00000445388 NAPAP54920 295 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 CCT2P78371 535 aaKnown RBP17.6■□□□□ 0.41
SEC22C-208ENST00000445388 SEMA3FQ13275 785 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 LAMC2Q13753 1193 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 SHHQ15465 462 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 CELF3Q5SZQ8 465 aaKnown RBP17.6■□□□□ 0.41
SEC22C-208ENST00000445388 MYSM1Q5VVJ2 828 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 EMID1Q96A84 441 aaPredicted RBP17.6■□□□□ 0.41
SEC22C-208ENST00000445388 TM6SF1Q9BZW5 370 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 ALDH8A1Q9H2A2 487 aaPredicted RBP17.6■□□□□ 0.41
SEC22C-208ENST00000445388 TRIOBPQ9H2D6 2365 aa17.6■□□□□ 0.41
SEC22C-208ENST00000445388 UBA1P22314 1058 aaKnown RBP17.59■□□□□ 0.41
SEC22C-208ENST00000445388 EVCP57679 992 aa17.59■□□□□ 0.41
SEC22C-208ENST00000445388 HSDL1Q3SXM5 330 aa17.59■□□□□ 0.41
SEC22C-208ENST00000445388 FAM47CQ5HY64 1035 aa17.59■□□□□ 0.41
SEC22C-208ENST00000445388 PCNX4Q63HM2 1172 aa17.59■□□□□ 0.41
SEC22C-208ENST00000445388 KCNV1Q6PIU1 500 aa17.59■□□□□ 0.41
SEC22C-208ENST00000445388 KAT2BQ92831 832 aa17.59■□□□□ 0.41
SEC22C-208ENST00000445388 PHKBQ93100 1093 aa17.59■□□□□ 0.41
SEC22C-208ENST00000445388 INPP4AQ96PE3 977 aaPredicted RBP17.59■□□□□ 0.41
SEC22C-208ENST00000445388 NCOA5Q9HCD5 579 aaKnown RBP17.59■□□□□ 0.41
SEC22C-208ENST00000445388 TRMT13Q9NUP7 481 aaKnown RBP17.59■□□□□ 0.41
SEC22C-208ENST00000445388 PCDHA6Q9UN73 950 aa17.59■□□□□ 0.41
SEC22C-208ENST00000445388 PCDHA8Q9Y5H6 950 aa17.59■□□□□ 0.41
SEC22C-208ENST00000445388 NID2Q14112 1375 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms