RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SNX29Q8TEQ0 813 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 SMCR8Q8TEV9 937 aaPredicted RBP18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 COA7Q96BR5 231 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 ALS2CR12Q96Q35 445 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 CRACR2AQ9BSW2 395 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 CAPN6Q9Y6Q1 641 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 CDK5RAP2Q96SN8 1893 aa18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 FRMPD2Q68DX3 1309 aaPredicted RBP18.31■□□□□ 0.52
SEMA3B-207ENST00000441915 UFL1O94874 794 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 TDP2O95551 362 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 SYF2O95926 243 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 EIF4A3P38919 411 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 C2orf54Q08AI8 447 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 CCNI2Q6ZMN8 369 aaPredicted RBP18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 CREG2Q8IUH2 290 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 RAD54LQ92698 747 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 TSG101Q99816 390 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 LCA5LO95447 670 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 PRLRP16471 622 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 RHBDL3P58872 404 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 GPSM2P81274 684 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 PSMD2Q13200 908 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 MFSD14BQ5SR56 506 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 RRAGAQ7L523 313 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 DDX12PQ92771 950 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 RIC8AQ9NPQ8 531 aa18.3■□□□□ 0.52
SEMA3B-207ENST00000441915 LRRC53A6NM62 1247 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 IL1R1P14778 569 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 ASPRV1Q53RT3 343 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 FAM163AQ96GL9 167 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 GDAP1L1Q96MZ0 367 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 ITIH3Q06033 890 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 TRAPPC3LQ5T215 181 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 CACNA2D4Q7Z3S7 1137 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 SELENOOQ9BVL4 669 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 RPS6KA5O75582 802 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 MOCS3O95396 460 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 MMGT1Q8N4V1 131 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 AFAP1L1Q8TED9 768 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 TANGO6Q9C0B7 1094 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 MLXIPQ9HAP2 919 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 MTMR4Q9NYA4 1195 aa18.29■□□□□ 0.52
SEMA3B-207ENST00000441915 MYBL2P10244 700 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 TCP1P17987 556 aaKnown RBP18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 LRRC55Q6ZSA7 311 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 GGA1Q9UJY5 639 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 MAGEA1P43355 309 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 TNNI2P48788 182 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 FOXR2Q6PJQ5 311 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 GSPT2Q8IYD1 628 aaKnown RBP18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 LRRC47Q8N1G4 583 aaKnown RBP18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 PROM2Q8N271 834 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 EDEM3Q9BZQ6 932 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 FAM184BQ9ULE4 1060 aa18.28■□□□□ 0.52
SEMA3B-207ENST00000441915 MYH10P35580 1976 aa18.27■□□□□ 0.52
SEMA3B-207ENST00000441915 PRPF6O94906 941 aaKnown RBP18.27■□□□□ 0.52
SEMA3B-207ENST00000441915 ERCC3P19447 782 aa18.27■□□□□ 0.52
SEMA3B-207ENST00000441915 EHHADHQ08426 723 aa18.27■□□□□ 0.52
SEMA3B-207ENST00000441915 ZNF572Q7Z3I7 529 aaPredicted RBP18.27■□□□□ 0.52
SEMA3B-207ENST00000441915 TBC1D22AQ8WUA7 517 aa18.27■□□□□ 0.52
SEMA3B-207ENST00000441915 BAP1Q92560 729 aa18.27■□□□□ 0.52
SEMA3B-207ENST00000441915 OSBPL9Q96SU4 736 aa18.27■□□□□ 0.52
SEMA3B-207ENST00000441915 HYOU1Q9Y4L1 999 aa18.27■□□□□ 0.52
SEMA3B-207ENST00000441915 EDIL3O43854 480 aa18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 LRRC41Q15345 812 aa18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 TMEM119Q4V9L6 283 aa18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 CCDC181Q5TID7 509 aa18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 PPP4R3AQ6IN85 833 aa18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 MYOCDQ8IZQ8 938 aa18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 SPATA4Q8NEY3 305 aa18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 RUBCNQ92622 972 aa18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 GAKO14976 1311 aa18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 ZC3H4Q9UPT8 1303 aaKnown RBP18.27■□□□□ 0.51
SEMA3B-207ENST00000441915 GGCXP38435 758 aa18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 FKBP3Q00688 224 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 KCNK18Q7Z418 384 aa18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 SSU72P8A0A1W2PR75 194 aa18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 PJA2O43164 708 aa18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 MARCH6O60337 910 aa18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 SEPT2Q15019 361 aa18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 ARHGAP27Q6ZUM4 889 aa18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 GPCPD1Q9NPB8 672 aa18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 PLIN4Q96Q06 1357 aa18.26■□□□□ 0.51
SEMA3B-207ENST00000441915 SNHG28P0DPA3 235 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 EIF6P56537 245 aaKnown RBP18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 ATP2B2Q01814 1243 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 PPP1R18Q6NYC8 613 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 NFRKBQ6P4R8 1299 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 PDXDC1Q6P996 788 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 RIN2Q8WYP3 895 aaPredicted RBP18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 EFCC1Q9HA90 598 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 BMP2KQ9NSY1 1161 aaPredicted RBP18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 DDX25Q9UHL0 483 aaKnown RBP18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 COL4A3BPQ9Y5P4 624 aa18.25■□□□□ 0.51
SEMA3B-207ENST00000441915 BTAF1O14981 1849 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms