RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ZHX2Q9Y6X8 837 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 PP2D1A8MPX8 630 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 B4DLN1 442 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 CCP110O43303 1012 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 RHOBTB3O94955 611 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 EGFRP00533 1210 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 VCAM1P19320 739 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 MUTP22033 750 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 HOXA13P31271 388 aaPredicted RBP6.74□□□□□ -1.33
VPS50-205ENST00000441602 CUL4BQ13620 913 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 TTLL12Q14166 644 aaPredicted RBP6.74□□□□□ -1.33
VPS50-205ENST00000441602 UNC13DQ70J99 1090 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 CCDC186Q7Z3E2 898 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 ARMC9Q7Z3E5 817 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 TMC6Q7Z403 805 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 CCDC112Q8NEF3 446 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 NELFBQ8WX92 580 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 STAMQ92783 540 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 TEKT3Q9BXF9 490 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 DNM3Q9UQ16 869 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 A0A087WWV3 80 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 GAS7O60861 476 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 DDNO94850 711 aaPredicted RBP6.74□□□□□ -1.33
VPS50-205ENST00000441602 IDEP14735 1019 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 SFPQP23246 707 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS50-205ENST00000441602 CDC25AP30304 524 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 GRB10Q13322 594 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 COG2Q14746 738 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 NCAPHQ15003 741 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 KMT5BQ4FZB7 885 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 HYIQ5T013 277 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 KLRG1Q96E93 195 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 TRIM47Q96LD4 638 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 XPO4Q9C0E2 1151 aaKnown RBP6.74□□□□□ -1.33
VPS50-205ENST00000441602 SLC38A10Q9HBR0 1119 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 FBXO28Q9NVF7 368 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 FANCLQ9NW38 375 aa6.74□□□□□ -1.33
VPS50-205ENST00000441602 ASTN2O75129 1339 aaPredicted RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 ZNF500O60304 480 aaPredicted RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 COPB2P35606 906 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 PRELPP51888 382 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 LRCH2Q5VUJ6 765 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 FILIP1Q7Z7B0 1213 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 NLRX1Q86UT6 975 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 CCDC84Q86UT8 332 aaPredicted RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 CCDC43Q96MW1 224 aaKnown RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 MPHOSPH6Q99547 160 aaKnown RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 GLIS2Q9BZE0 524 aaPredicted RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 TRIM9Q9C026 710 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 RAVER2Q9HCJ3 691 aaKnown RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 TUFT1Q9NNX1 390 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 POTEMA6NI47 508 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 PTGS1P23219 599 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 DSG3P32926 999 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 HSD17B4P51659 736 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 MCM6Q14566 821 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 CEP55Q53EZ4 464 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 KIAA1755Q5JYT7 1200 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 STXBP4Q6ZWJ1 553 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 PPFIBP1Q86W92 1011 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 MB21D1Q8N884 522 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 RIT2Q99578 217 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 POLR3CQ9BUI4 534 aaPredicted RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 EMILIN3Q9NT22 766 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 RNF146Q9NTX7 359 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 FBXO40Q9UH90 709 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 DKC1O60832 514 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS50-205ENST00000441602 TBCAO75347 108 aaKnown RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 CCNE1P24864 410 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 HMGCS2P54868 508 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 STX17P56962 302 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 GHRHRQ02643 423 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 NAALADL2Q58DX5 795 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 DNTTIP2Q5QJE6 756 aaKnown RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 NSMFQ6X4W1 530 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 RNF207Q6ZRF8 634 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 TRMT44Q8IYL2 757 aaKnown RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 ADSSL1Q8N142 457 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS50-205ENST00000441602 HAS1Q92839 578 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 L3MBTL3Q96JM7 780 aaPredicted RBP6.73□□□□□ -1.33
VPS50-205ENST00000441602 TRERF1Q96PN7 1200 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 PNMA5Q96PV4 448 aa6.73□□□□□ -1.33
VPS50-205ENST00000441602 PPP1R3GB7ZBB8 358 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 AP5Z1O43299 807 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 PLA2G4BP0C869 781 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 BCRP11274 1271 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 EEF1GP26641 437 aaKnown RBP6.72□□□□□ -1.33
VPS50-205ENST00000441602 RPA1P27694 616 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 CCND2P30279 289 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 EPHX2P34913 555 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 TRIM14Q14142 442 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 EPHA7Q15375 998 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 COBLL1Q53SF7 1204 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 SH3D19Q5HYK7 790 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 PNMA8AQ86V59 439 aaPredicted RBP6.72□□□□□ -1.33
VPS50-205ENST00000441602 GPBP1Q86WP2 473 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 ANKRD13AQ8IZ07 590 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 GIMAP8Q8ND71 665 aaPredicted RBP6.72□□□□□ -1.33
VPS50-205ENST00000441602 ETNPPLQ8TBG4 499 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms