RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 RTN1Q16799 776 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 RCSD1Q6JBY9 416 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 SGMS1Q86VZ5 419 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 GSDMAQ96QA5 445 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 DNAJC7Q99615 494 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 MOCS3O95396 460 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 ATP6V1G2O95670 118 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 GLI1P08151 1106 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 TM4SF1P30408 202 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 HSPA1LP34931 641 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 GUCY2DQ02846 1103 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 PAK1Q13153 545 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 SYMPKQ92797 1274 aaKnown RBP18.55■□□□□ 0.56
PMS1-213ENST00000441310 SEC16BQ96JE7 1060 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 OSBPL9Q96SU4 736 aa18.55■□□□□ 0.56
PMS1-213ENST00000441310 NMT2O60551 498 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 MMP1P03956 469 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 ZNF579Q8NAF0 562 aaKnown RBP18.54■□□□□ 0.56
PMS1-213ENST00000441310 OXER1Q8TDS5 423 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 MICAL1Q8TDZ2 1067 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 ETAA1Q9NY74 926 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 TNKSO95271 1327 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 LIFRP42702 1097 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 IFFO1Q0D2I5 559 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 FAM47AQ5JRC9 791 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 MB21D1Q8N884 522 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 PIK3R5Q8WYR1 880 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 TATDN2Q93075 761 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 HVCN1Q96D96 273 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 SAAL1Q96ER3 474 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 ZNHIT6Q9NWK9 470 aaKnown RBP18.54■□□□□ 0.56
PMS1-213ENST00000441310 L3MBTL1Q9Y468 752 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 C4AP0C0L4 1744 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 C4BP0C0L5 1744 aa18.54■□□□□ 0.56
PMS1-213ENST00000441310 PAFAH1B1P43034 410 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 MAB21L3Q8N8X9 362 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 NSUN4Q96CB9 384 aaKnown RBP18.53■□□□□ 0.56
PMS1-213ENST00000441310 TRIM49BA6NDI0 452 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 FAM205CA6NFA0 338 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 TACC1O75410 805 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 ZNF654Q8IZM8 581 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 CACNA2D3Q8IZS8 1091 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 CNBD1Q8NA66 436 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 TCP11Q8WWU5 503 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 EEF2KMTQ96G04 330 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 MS4A14Q96JA4 679 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 PCMTD1Q96MG8 357 aaPredicted RBP18.53■□□□□ 0.56
PMS1-213ENST00000441310 MGRN1O60291 552 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 HEXIM1O94992 359 aaKnown RBP18.53■□□□□ 0.56
PMS1-213ENST00000441310 PARP1P09874 1014 aaKnown RBP18.53■□□□□ 0.56
PMS1-213ENST00000441310 ELF3P78545 371 aaPredicted RBP18.53■□□□□ 0.56
PMS1-213ENST00000441310 IFT20Q8IY31 132 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 SPDYE1Q8NFV5 336 aaPredicted RBP18.53■□□□□ 0.56
PMS1-213ENST00000441310 HOOK2Q96ED9 719 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 SLC39A2Q9NP94 309 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 CPSF2Q9P2I0 782 aaKnown RBP18.53■□□□□ 0.56
PMS1-213ENST00000441310 PLAAQ9Y263 795 aa18.53■□□□□ 0.56
PMS1-213ENST00000441310 TRIM21P19474 475 aaKnown RBP18.52■□□□□ 0.56
PMS1-213ENST00000441310 KLK7P49862 253 aa18.52■□□□□ 0.56
PMS1-213ENST00000441310 XRCC4Q13426 336 aa18.52■□□□□ 0.56
PMS1-213ENST00000441310 SNX1Q13596 522 aa18.52■□□□□ 0.56
PMS1-213ENST00000441310 PNMA8AQ86V59 439 aaPredicted RBP18.52■□□□□ 0.56
PMS1-213ENST00000441310 RNF41Q9H4P4 317 aaPredicted RBP18.52■□□□□ 0.56
PMS1-213ENST00000441310 CAPN11Q9UMQ6 739 aa18.52■□□□□ 0.56
PMS1-213ENST00000441310 MTMR7Q9Y216 660 aa18.52■□□□□ 0.56
PMS1-213ENST00000441310 MYH10P35580 1976 aa18.52■□□□□ 0.56
PMS1-213ENST00000441310 GOLGA6L10A6NI86 522 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 HMGB1P1B2RPK0 211 aaPredicted RBP18.52■□□□□ 0.55
PMS1-213ENST00000441310 CLTAP09496 248 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 TRADDQ15628 312 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 GRIK5Q16478 980 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 BZW1Q7L1Q6 419 aaKnown RBP18.52■□□□□ 0.55
PMS1-213ENST00000441310 SH3RF1Q7Z6J0 888 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 OR2W6PQ8NHA6 318 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 ESR2Q92731 530 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 CUL5Q93034 780 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 NUP58Q9BVL2 599 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 RWDD2AQ9UIY3 292 aa18.52■□□□□ 0.55
PMS1-213ENST00000441310 BAZ2AQ9UIF9 1905 aaKnown RBP18.52■□□□□ 0.55
PMS1-213ENST00000441310 COL5A3P25940 1745 aaPredicted RBP18.51■□□□□ 0.55
PMS1-213ENST00000441310 MPHOSPH10O00566 681 aaKnown RBP18.51■□□□□ 0.55
PMS1-213ENST00000441310 DIXDC1Q155Q3 683 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 ODF2Q5BJF6 829 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 CAPRIN2Q6IMN6 1127 aaKnown RBP18.51■□□□□ 0.55
PMS1-213ENST00000441310 PPP4R3AQ6IN85 833 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 FANCBQ8NB91 859 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 TRIM58Q8NG06 486 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 CCDC26Q8TAB7 109 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 YIPF3Q9GZM5 350 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 CEP131Q9UPN4 1083 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 GDAQ9Y2T3 454 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 PAK2Q13177 524 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 CDCA2Q69YH5 1023 aaPredicted RBP18.51■□□□□ 0.55
PMS1-213ENST00000441310 RUBCNQ92622 972 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 TRPC6Q9Y210 931 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 HYOU1Q9Y4L1 999 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 SPA17Q15506 151 aa18.51■□□□□ 0.55
PMS1-213ENST00000441310 GLE1Q53GS7 698 aaKnown RBP18.51■□□□□ 0.55
PMS1-213ENST00000441310 DZIP1Q86YF9 867 aaKnown RBP18.51■□□□□ 0.55
PMS1-213ENST00000441310 ANKRD13CQ8N6S4 541 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms