RNA–Protein interactions for RNA: ENST00000440759.5

TRO-213, Transcript of trophinin, human

TSL 4

Gene TRO, Length 672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-213	ENST00000440759	KAT2B	Q92831	832 aa		13.16	□□□□□ -0.3
TRO-213	ENST00000440759	SCLY	Q96I15	445 aa		13.16	□□□□□ -0.3
TRO-213	ENST00000440759	IWS1	Q96ST2	819 aa		13.16	□□□□□ -0.3
TRO-213	ENST00000440759	DDX41	Q9UJV9	622 aa	Known RBP	13.16	□□□□□ -0.3
TRO-213	ENST00000440759	PCDHA1	Q9Y5I3	950 aa		13.16	□□□□□ -0.3
TRO-213	ENST00000440759	TMEM265	A0A087WTH1	108 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.15	□□□□□ -0.3
TRO-213	ENST00000440759	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.15	□□□□□ -0.3
TRO-213	ENST00000440759		B4DLN1	442 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	SLC27A2	O14975	620 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	GH1	P01241	217 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	NR3C2	P08235	984 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	MRPL12	P52815	198 aa	Known RBP	13.15	□□□□□ -0.3
TRO-213	ENST00000440759	ARHGEF16	Q5VV41	709 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	NFRKB	Q6P4R8	1299 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	ZNF654	Q8IZM8	581 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	HERVK_113	Q902F9	699 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	PBX4	Q9BYU1	374 aa		13.15	□□□□□ -0.3
TRO-213	ENST00000440759	FRMPD4	Q14CM0	1322 aa		13.14	□□□□□ -0.31
TRO-213	ENST00000440759	PNMA6F	A0A0J9YX94	578 aa		13.14	□□□□□ -0.31
TRO-213	ENST00000440759	ERICH2	A1L162	156 aa		13.14	□□□□□ -0.31
TRO-213	ENST00000440759	SH2B2	O14492	632 aa	Predicted RBP	13.14	□□□□□ -0.31
TRO-213	ENST00000440759	PRC1	O43663	620 aa		13.14	□□□□□ -0.31
TRO-213	ENST00000440759	EIF3J	O75822	258 aa	Known RBP	13.14	□□□□□ -0.31
TRO-213	ENST00000440759	GRIN2C	Q14957	1233 aa		13.14	□□□□□ -0.31
TRO-213	ENST00000440759	PGM5	Q15124	567 aa		13.14	□□□□□ -0.31
TRO-213	ENST00000440759	FAM47C	Q5HY64	1035 aa		13.14	□□□□□ -0.31
TRO-213	ENST00000440759	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.14	□□□□□ -0.31
TRO-213	ENST00000440759	EMID1	Q96A84	441 aa	Predicted RBP	13.14	□□□□□ -0.31
TRO-213	ENST00000440759	ZFP91	Q96JP5	570 aa	Predicted RBP	13.14	□□□□□ -0.31
TRO-213	ENST00000440759	TRANK1	O15050	2925 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	KPNA6	O60684	536 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	DDAH1	O94760	285 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	PLEKHA8P1	O95397	391 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	MYCL	P12524	364 aa	Predicted RBP	13.13	□□□□□ -0.31
TRO-213	ENST00000440759	HOXD8	P13378	290 aa	Predicted RBP	13.13	□□□□□ -0.31
TRO-213	ENST00000440759	SART3	Q15020	963 aa	Known RBP	13.13	□□□□□ -0.31
TRO-213	ENST00000440759	NECTIN1	Q15223	517 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	BRDT	Q58F21	947 aa	Predicted RBP	13.13	□□□□□ -0.31
TRO-213	ENST00000440759	BMP2KL	Q5H9B9	411 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	CREB3L3	Q68CJ9	461 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	OTOP2	Q7RTS6	562 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	CATIP	Q7Z7H3	387 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	VSIG10L	Q86VR7	867 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	PIBF1	Q8WXW3	757 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	TIFA	Q96CG3	184 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	SPZ1	Q9BXG8	430 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	YBX2	Q9Y2T7	364 aa	Known RBP	13.13	□□□□□ -0.31
TRO-213	ENST00000440759	MRVI1	Q9Y6F6	885 aa		13.13	□□□□□ -0.31
TRO-213	ENST00000440759	F2	P00734	622 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	FGB	P02675	491 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	SUPT20HL2	P0C7V6	817 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	ZNF286B	P0CG31	522 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	RXRA	P19793	462 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	UBA1	P22314	1058 aa	Known RBP	13.12	□□□□□ -0.31
TRO-213	ENST00000440759	SP2	Q02086	613 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	PTPN11	Q06124	597 aa	Predicted RBP	13.12	□□□□□ -0.31
TRO-213	ENST00000440759	GDF6	Q6KF10	455 aa	Predicted RBP	13.12	□□□□□ -0.31
TRO-213	ENST00000440759	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.12	□□□□□ -0.31
TRO-213	ENST00000440759	SESTD1	Q86VW0	696 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	RAB11FIP4	Q86YS3	637 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	CMTR1	Q8N1G2	835 aa	Known RBP	13.12	□□□□□ -0.31
TRO-213	ENST00000440759	MAFA	Q8NHW3	353 aa	Predicted RBP	13.12	□□□□□ -0.31
TRO-213	ENST00000440759	PPTC7	Q8NI37	304 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	DHX38	Q92620	1227 aa	Known RBP	13.12	□□□□□ -0.31
TRO-213	ENST00000440759	MAP3K14	Q99558	947 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	MTA3	Q9BTC8	594 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	LRRC2	Q9BYS8	371 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	ZNF576	Q9H609	170 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	BCAS3	Q9H6U6	928 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	ANO2	Q9NQ90	1003 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	MAP3K20	Q9NYL2	800 aa	Known RBP	13.12	□□□□□ -0.31
TRO-213	ENST00000440759	MUC3A	Q02505	3323 aa		13.12	□□□□□ -0.31
TRO-213	ENST00000440759	REV3L	O60673	3130 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.11	□□□□□ -0.31
TRO-213	ENST00000440759	HAS3	O00219	553 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	PITPNM1	O00562	1244 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	SORBS3	O60504	671 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	POLR2M	P0CAP2	368 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	FOSL2	P15408	326 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	MCM5	P33992	734 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	CHMP4BP1	P59074	171 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	MRPS9	P82933	396 aa	Known RBP	13.11	□□□□□ -0.31
TRO-213	ENST00000440759	SEMA3F	Q13275	785 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	HIC1	Q14526	733 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	GPNMB	Q14956	572 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	HSDL1	Q3SXM5	330 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	MYSM1	Q5VVJ2	828 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	FCHSD1	Q86WN1	690 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	SRBD1	Q8N5C6	995 aa	Known RBP	13.11	□□□□□ -0.31
TRO-213	ENST00000440759	SAMD3	Q8N6K7	520 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	TELO2	Q9Y4R8	837 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	COL4A4	P53420	1690 aa	Predicted RBP	13.11	□□□□□ -0.31
TRO-213	ENST00000440759	SI	P14410	1827 aa		13.11	□□□□□ -0.31
TRO-213	ENST00000440759	GGPS1	O95749	300 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	IQCF3	P0C7M6	154 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	CCND2	P30279	289 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	PSEN2	P49810	448 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	PTGIS	Q16647	500 aa		13.1	□□□□□ -0.31
TRO-213	ENST00000440759	DGKD	Q16760	1214 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms