RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 ABT1Q9ULW3 272 aaKnown RBP7.63□□□□□ -1.19
CHD6-204ENST00000440647 LAS1LQ9Y4W2 734 aaKnown RBP7.63□□□□□ -1.19
CHD6-204ENST00000440647 LTBP1Q14766 1721 aa7.63□□□□□ -1.19
CHD6-204ENST00000440647 TRPM7Q96QT4 1865 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 ABCC4O15439 1325 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 MYBBP1AQ9BQG0 1328 aaKnown RBP7.62□□□□□ -1.19
CHD6-204ENST00000440647 PRAMEF27A3QJZ7 478 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 ANXA1P04083 346 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 TFE3P19532 575 aaPredicted RBP7.62□□□□□ -1.19
CHD6-204ENST00000440647 TMPOP42166 694 aaKnown RBP7.62□□□□□ -1.19
CHD6-204ENST00000440647 CDK8P49336 464 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 SEPT6Q14141 434 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 AOC3Q16853 763 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 WIPI1Q5MNZ9 446 aaPredicted RBP7.62□□□□□ -1.19
CHD6-204ENST00000440647 TOP6BLQ8N6T0 577 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 MIR1-1HGQ9H1L0 117 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 TLR6Q9Y2C9 796 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 COL4A5P29400 1685 aa7.62□□□□□ -1.19
CHD6-204ENST00000440647 GFRA2O00451 464 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 FOXN1O15353 648 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 CTCFP49711 727 aaPredicted RBP7.61□□□□□ -1.19
CHD6-204ENST00000440647 PROSER3Q2NL68 480 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 DEFB115Q30KQ5 88 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 DPP8Q6V1X1 898 aaPredicted RBP7.61□□□□□ -1.19
CHD6-204ENST00000440647 USP50Q70EL3 339 aaPredicted RBP7.61□□□□□ -1.19
CHD6-204ENST00000440647 DDX46Q7L014 1031 aaKnown RBP7.61□□□□□ -1.19
CHD6-204ENST00000440647 COPS6Q7L5N1 327 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 CCDC146Q8IYE0 955 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 XAGE3Q8WTP9 111 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 VPS33BQ9H267 617 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 MKNK2Q9HBH9 465 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 PRDM10Q9NQV6 1147 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 TRMT112Q9UI30 125 aaKnown RBP7.61□□□□□ -1.19
CHD6-204ENST00000440647 ATP6V0A2Q9Y487 856 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 TACC3Q9Y6A5 838 aa7.61□□□□□ -1.19
CHD6-204ENST00000440647 DDX60Q8IY21 1712 aaKnown RBP7.61□□□□□ -1.19
CHD6-204ENST00000440647 SH3TC1Q8TE82 1336 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 RASSF10A6NK89 507 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 BBOX1O75936 387 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 EPS15P42566 896 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 GRM1Q13255 1194 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 TSNAXIP1Q2TAA8 658 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 SLC10A5Q5PT55 438 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 FAM214BQ7L5A3 538 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 NLRP10Q86W26 655 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 PHC3Q8NDX5 983 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 NETO1Q8TDF5 533 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 GIPC2Q8TF65 315 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 RUNDC1Q96C34 613 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 DDX21Q9NR30 783 aaKnown RBP eCLIP7.6□□□□□ -1.19
CHD6-204ENST00000440647 ADARB2Q9NS39 739 aaKnown RBP7.6□□□□□ -1.19
CHD6-204ENST00000440647 LRRC37AA6NMS7 1700 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 TAF1P21675 1872 aa7.6□□□□□ -1.19
CHD6-204ENST00000440647 CDHR2Q9BYE9 1310 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 WDR33Q9C0J8 1336 aaKnown RBP7.59□□□□□ -1.19
CHD6-204ENST00000440647 LRIG2O94898 1065 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 CAP2P40123 477 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 ECE1P42892 770 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 OXCT1P55809 520 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 ETF1P62495 437 aaKnown RBP7.59□□□□□ -1.19
CHD6-204ENST00000440647 MAP2K1Q02750 393 aaPredicted RBP7.59□□□□□ -1.19
CHD6-204ENST00000440647 DDX10Q13206 875 aaKnown RBP7.59□□□□□ -1.19
CHD6-204ENST00000440647 TCIRG1Q13488 830 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 GRAPQ13588 217 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 CIAPIN1Q6FI81 312 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 NFXL1Q6ZNB6 911 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 LRP10Q7Z4F1 713 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 CCDC84Q86UT8 332 aaPredicted RBP7.59□□□□□ -1.19
CHD6-204ENST00000440647 RELL1Q8IUW5 271 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 SP8Q8IXZ3 490 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 FAM181AQ8N9Y4 354 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 GRAPLQ8TC17 118 aaPredicted RBP7.59□□□□□ -1.19
CHD6-204ENST00000440647 JARID2Q92833 1246 aaPredicted RBP7.59□□□□□ -1.19
CHD6-204ENST00000440647 RSRP1Q9BUV0 290 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 FBRSQ9HAH7 460 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 CHPF2Q9P2E5 772 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 ZNRF3Q9ULT6 936 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 THSD7BQ9C0I4 1608 aa7.59□□□□□ -1.19
CHD6-204ENST00000440647 HOXB7P09629 217 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 JUNBP17275 347 aaPredicted RBP7.58□□□□□ -1.2
CHD6-204ENST00000440647 RPL6Q02878 288 aaKnown RBP7.58□□□□□ -1.2
CHD6-204ENST00000440647 KIAA2012Q0VF49 1180 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 SLBPQ14493 270 aaKnown RBP eCLIP7.58□□□□□ -1.2
CHD6-204ENST00000440647 TNIP1Q15025 636 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 KRT24Q2M2I5 525 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 ARMCX6Q7L4S7 300 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 HID1Q8IV36 788 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 STK11IPQ8N1F8 1099 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 PLD6Q8N2A8 252 aaKnown RBP7.58□□□□□ -1.2
CHD6-204ENST00000440647 FLCNQ8NFG4 579 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 PLBD2Q8NHP8 589 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 MISP3Q96FF7 219 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 HEXIM2Q96MH2 286 aaKnown RBP7.58□□□□□ -1.2
CHD6-204ENST00000440647 RTFDC1Q9BY42 306 aaPredicted RBP7.58□□□□□ -1.2
CHD6-204ENST00000440647 KRTAP9-9Q9BYP9 154 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 KRTAP9-4Q9BYQ2 154 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 FOXQ1Q9C009 403 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 GPRC5DQ9NZD1 345 aa7.58□□□□□ -1.2
CHD6-204ENST00000440647 DBF4Q9UBU7 674 aaPredicted RBP7.58□□□□□ -1.2
CHD6-204ENST00000440647 GTF2IRD1Q9UHL9 959 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms