RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 NNTQ13423 1086 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 ERFEQ4G0M1 354 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 KRT25Q7Z3Z0 450 aa16.92■□□□□ 0.3
CDC42EP4-202ENST00000439510 MAN2A1Q16706 1144 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 ASTE1Q2TB18 679 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 GLE1Q53GS7 698 aaKnown RBP16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 DRC1Q96MC2 740 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 FAM207AQ9NSI2 230 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 ZNF652Q9Y2D9 606 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 A6NNZ2 444 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 EBAG9O00559 213 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 RFC4P35249 363 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 TUBB8Q3ZCM7 444 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 TSEN2Q8NCE0 465 aaKnown RBP16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 BAP1Q92560 729 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 HINFPQ9BQA5 517 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 LZTS2Q9BRK4 669 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 DEF6Q9H4E7 631 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 AKR1B10O60218 316 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 CCNT1O60563 726 aaKnown RBP16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 CLSTN1O94985 981 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 SLC7A5Q01650 507 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 CCDC181Q5TID7 509 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 TLR10Q9BXR5 811 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 SALL4Q9UJQ4 1053 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 SRCAPQ6ZRS2 3230 aa16.91■□□□□ 0.3
CDC42EP4-202ENST00000439510 UBR3Q6ZT12 1888 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 LRRC53A6NM62 1247 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 ORC2Q13416 577 aaPredicted RBP16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 NONOQ15233 471 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 TTMPQ5BVD1 217 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 RNF10Q8N5U6 811 aaKnown RBP16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 BCAS4Q8TDM0 211 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 HPS3Q969F9 1004 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 EDEM3Q9BZQ6 932 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 NAV1Q8NEY1 1877 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 HIBADHP31937 336 aaKnown RBP16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 PAFAH1B1P43034 410 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 MAGEA1P43355 309 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 GNGT1P63211 74 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 LETM2Q2VYF4 491 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 CLEC4GQ6UXB4 293 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 ARHGAP27Q6ZUM4 889 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 SPZ1Q9BXG8 430 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 EHD4Q9H223 541 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 SLC39A2Q9NP94 309 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 NARFQ9UHQ1 456 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 TSKSQ9UJT2 592 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 FAM169AQ9Y6X4 670 aa16.9■□□□□ 0.3
CDC42EP4-202ENST00000439510 PVALEFA0A1B0GWK0 134 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 SSU72P8A0A1W2PR75 194 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 RBAK-RBAKDNI3L0D1 243 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 HSF2BPO75031 334 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 FGFR1OPO95684 399 aaKnown RBP16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 CXCR5P32302 372 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 UNC13DQ70J99 1090 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 NEK8Q86SG6 692 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 GUF1Q8N442 669 aaKnown RBP16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 RNF14Q9UBS8 474 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 SHTN1A0MZ66 631 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 TECP42680 631 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 EN1Q05925 392 aaPredicted RBP16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 KLHDC7AQ5VTJ3 777 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 C8orf74Q6P047 294 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 FOXR2Q6PJQ5 311 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 RRAGAQ7L523 313 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 CALML4Q96GE6 196 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 MMRN2Q9H8L6 949 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 RBM12Q9NTZ6 932 aaKnown RBP16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 SMARCAL1Q9NZC9 954 aa16.89■□□□□ 0.29
CDC42EP4-202ENST00000439510 HOXA7P31268 230 aaPredicted RBP16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 SLC27A3Q5K4L6 730 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 PDXDC1Q6P996 788 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 SV2BQ7L1I2 683 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 SUGP1Q8IWZ8 645 aaKnown RBP16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 ARL8AQ96BM9 186 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 MTMR8Q96EF0 704 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 DYNLL2Q96FJ2 89 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 NOX5Q96PH1 765 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 BLOC1S4Q9NUP1 217 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 EHD2Q9NZN4 543 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 STK17AQ9UEE5 414 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 ATXN2Q99700 1313 aaKnown RBP16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 TNS1Q9HBL0 1735 aaKnown RBP16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 NCK2O43639 380 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 HGSNATQ68CP4 663 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 LRRC55Q6ZSA7 311 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 PSMB7Q99436 277 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 GDF3Q9NR23 364 aa16.88■□□□□ 0.29
CDC42EP4-202ENST00000439510 MYMKA6NI61 221 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms