RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 GNPTABQ3T906 1256 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 MFSD14CQ5VZR4 134 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 PPP4R3AQ6IN85 833 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 NIPA1Q7RTP0 329 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 PGBD1Q96JS3 809 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 ABHD16BQ9H3Z7 469 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 VTA1Q9NP79 307 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 PTPN22Q9Y2R2 807 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 ATP6V1DQ9Y5K8 247 aa20.95■□□□□ 0.94
HDAC6-208ENST00000438518 MAFGO15525 162 aa20.94■□□□□ 0.94
HDAC6-208ENST00000438518 F13A1P00488 732 aa20.94■□□□□ 0.94
HDAC6-208ENST00000438518 HMGCRP04035 888 aa20.94■□□□□ 0.94
HDAC6-208ENST00000438518 SETQ01105 290 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-208ENST00000438518 RESTQ13127 1097 aa20.94■□□□□ 0.94
HDAC6-208ENST00000438518 INF2Q27J81 1249 aa20.94■□□□□ 0.94
HDAC6-208ENST00000438518 KCNV1Q6PIU1 500 aa20.94■□□□□ 0.94
HDAC6-208ENST00000438518 CDHR1Q96JP9 859 aa20.94■□□□□ 0.94
HDAC6-208ENST00000438518 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-208ENST00000438518 CNPY2Q9Y2B0 182 aa20.94■□□□□ 0.94
HDAC6-208ENST00000438518 MCM3APO60318 1980 aa20.94■□□□□ 0.94
HDAC6-208ENST00000438518 CYP3A7-CYP3A51PA0A087WV96 503 aa20.93■□□□□ 0.94
HDAC6-208ENST00000438518 ADCY3O60266 1144 aa20.93■□□□□ 0.94
HDAC6-208ENST00000438518 CYP3A7P24462 503 aa20.93■□□□□ 0.94
HDAC6-208ENST00000438518 ZNF76P36508 570 aa20.93■□□□□ 0.94
HDAC6-208ENST00000438518 EARS2Q5JPH6 523 aaKnown RBP20.93■□□□□ 0.94
HDAC6-208ENST00000438518 NLRX1Q86UT6 975 aa20.93■□□□□ 0.94
HDAC6-208ENST00000438518 TRIB2Q92519 343 aa20.93■□□□□ 0.94
HDAC6-208ENST00000438518 GPRASP2Q96D09 838 aa20.93■□□□□ 0.94
HDAC6-208ENST00000438518 INPP4AQ96PE3 977 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-208ENST00000438518 MYCLP12524 364 aaPredicted RBP20.92■□□□□ 0.94
HDAC6-208ENST00000438518 UBXN2AP68543 259 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 MRPS9P82933 396 aaKnown RBP20.92■□□□□ 0.94
HDAC6-208ENST00000438518 CCL14Q16627 93 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 LETM2Q2VYF4 491 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 CEP55Q53EZ4 464 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 MYSM1Q5VVJ2 828 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 FERMT3Q86UX7 667 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 IL31RAQ8NI17 732 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 MBOAT7Q96N66 472 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 MXRA8Q9BRK3 442 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 FLRT1Q9NZU1 646 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 CHMP5Q9NZZ3 219 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 UBIAD1Q9Y5Z9 338 aa20.92■□□□□ 0.94
HDAC6-208ENST00000438518 SNAI1O95863 264 aaPredicted RBP20.91■□□□□ 0.94
HDAC6-208ENST00000438518 GRK4P32298 578 aa20.91■□□□□ 0.94
HDAC6-208ENST00000438518 PKP1Q13835 747 aa20.91■□□□□ 0.94
HDAC6-208ENST00000438518 Q4G0T1 1027 aa20.91■□□□□ 0.94
HDAC6-208ENST00000438518 ATL3Q6DD88 541 aa20.91■□□□□ 0.94
HDAC6-208ENST00000438518 FBXO46Q6PJ61 603 aaPredicted RBP20.91■□□□□ 0.94
HDAC6-208ENST00000438518 JADE2Q9NQC1 790 aa20.91■□□□□ 0.94
HDAC6-208ENST00000438518 PTCH2Q9Y6C5 1203 aa20.91■□□□□ 0.94
HDAC6-208ENST00000438518 FIBPO43427 364 aa20.9■□□□□ 0.94
HDAC6-208ENST00000438518 CCNT1O60563 726 aaKnown RBP20.9■□□□□ 0.94
HDAC6-208ENST00000438518 BMP15O95972 392 aa20.9■□□□□ 0.94
HDAC6-208ENST00000438518 TGFB3P10600 412 aa20.9■□□□□ 0.94
HDAC6-208ENST00000438518 ICAM3P32942 547 aa20.9■□□□□ 0.94
HDAC6-208ENST00000438518 ACVR2BQ13705 512 aa20.9■□□□□ 0.94
HDAC6-208ENST00000438518 TTC38Q5R3I4 469 aa20.9■□□□□ 0.94
HDAC6-208ENST00000438518 KATNBL1Q9H079 304 aa20.9■□□□□ 0.94
HDAC6-208ENST00000438518 RBM47A0AV96 593 aaKnown RBP20.89■□□□□ 0.93
HDAC6-208ENST00000438518 FAM205CA6NFA0 338 aa20.89■□□□□ 0.93
HDAC6-208ENST00000438518 MEIS1O00470 390 aa20.89■□□□□ 0.93
HDAC6-208ENST00000438518 MTMR1Q13613 665 aa20.89■□□□□ 0.93
HDAC6-208ENST00000438518 SCFD2Q8WU76 684 aa20.89■□□□□ 0.93
HDAC6-208ENST00000438518 DDX25Q9UHL0 483 aaKnown RBP20.89■□□□□ 0.93
HDAC6-208ENST00000438518 CEP131Q9UPN4 1083 aa20.89■□□□□ 0.93
HDAC6-208ENST00000438518 IGLV3-22A0A075B6J6 115 aa20.88■□□□□ 0.93
HDAC6-208ENST00000438518 FAM86B1E9PN63 330 aa20.88■□□□□ 0.93
HDAC6-208ENST00000438518 TBX3O15119 743 aa20.88■□□□□ 0.93
HDAC6-208ENST00000438518 FAM86B2P0C5J1 330 aa20.88■□□□□ 0.93
HDAC6-208ENST00000438518 ITGB5P18084 799 aa20.88■□□□□ 0.93
HDAC6-208ENST00000438518 CYP2C19P33261 490 aa20.88■□□□□ 0.93
HDAC6-208ENST00000438518 MAP3K21Q5TCX8 1036 aa20.88■□□□□ 0.93
HDAC6-208ENST00000438518 GIMAP8Q8ND71 665 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-208ENST00000438518 ZNF396Q96N95 335 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-208ENST00000438518 ZDHHC9Q9Y397 364 aa20.88■□□□□ 0.93
HDAC6-208ENST00000438518 LAD1O00515 517 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 NKRFO15226 690 aaKnown RBP eCLIP20.87■□□□□ 0.93
HDAC6-208ENST00000438518 EDIL3O43854 480 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 NEMFO60524 1076 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 CYBAP13498 195 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 ELNP15502 786 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 TOB1P50616 345 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-208ENST00000438518 TTLL4Q14679 1199 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 SLC9C1Q4G0N8 1177 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 IQSEC1Q6DN90 963 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 PLA2G4DQ86XP0 818 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 FBXO16Q8IX29 292 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-208ENST00000438518 SENP7Q9BQF6 1050 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 RTEL1Q9NZ71 1219 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 ZHX1Q9UKY1 873 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-208ENST00000438518 MRVI1Q9Y6F6 885 aa20.87■□□□□ 0.93
HDAC6-208ENST00000438518 SPATA31C2B4DYI2 1134 aa20.86■□□□□ 0.93
HDAC6-208ENST00000438518 RGS20O76081 388 aa20.86■□□□□ 0.93
HDAC6-208ENST00000438518 TDP2O95551 362 aa20.86■□□□□ 0.93
HDAC6-208ENST00000438518 ZNF865P0CJ78 1059 aaPredicted RBP20.86■□□□□ 0.93
HDAC6-208ENST00000438518 AKR1A1P14550 325 aa20.86■□□□□ 0.93
HDAC6-208ENST00000438518 PRR16Q569H4 304 aa20.86■□□□□ 0.93
HDAC6-208ENST00000438518 TAPT1Q6NXT6 567 aa20.86■□□□□ 0.93
HDAC6-208ENST00000438518 LENG9Q96B70 501 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms