RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
ERGIC3-207ENST00000438317 GPCPD1Q9NPB8 672 aa12.38□□□□□ -0.43
ERGIC3-207ENST00000438317 INTS13Q9NVM9 706 aa12.38□□□□□ -0.43
ERGIC3-207ENST00000438317 BIN2Q9UBW5 565 aaPredicted RBP12.38□□□□□ -0.43
ERGIC3-207ENST00000438317 STK17AQ9UEE5 414 aa12.38□□□□□ -0.43
ERGIC3-207ENST00000438317 USP27XA6NNY8 438 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 MPHOSPH10O00566 681 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 ZBTB5O15062 677 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 ENTPD3O75355 529 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 GCFC2P16383 781 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 GJA5P36382 358 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 PBX1P40424 430 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 MMP14P50281 582 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 STX17P56962 302 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 TRAF1Q13077 416 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 CRHR2Q13324 411 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 CERKLQ49MI3 558 aaPredicted RBP12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 COBLL1Q53SF7 1204 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 NAALADL2Q58DX5 795 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 APTXQ7Z2E3 356 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 TC2NQ8N9U0 490 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 GIMAP8Q8ND71 665 aaPredicted RBP12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 STAMQ92783 540 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 CUL5Q93034 780 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 MTMR9Q96QG7 549 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 PTPN18Q99952 460 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 SYNPO2Q9UMS6 1093 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 CTNND2Q9UQB3 1225 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 SSC5DA1L4H1 1573 aa12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 FRMPD2Q68DX3 1309 aaPredicted RBP12.37□□□□□ -0.43
ERGIC3-207ENST00000438317 PVALEFA0A1B0GWK0 134 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 BICDL2A1A5D9 508 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 TESPA1A2RU30 521 aaPredicted RBP12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 H0YGN5 161 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 PSMA7O14818 248 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 EEF1GP26641 437 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 CASP1P29466 404 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 CDC25AP30304 524 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 PRCPP42785 496 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 ETF1P62495 437 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 RBM10P98175 930 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 SP3Q02447 781 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 CALCRLQ16602 461 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 TATDN1Q6P1N9 297 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 TMEM179Q6ZVK1 233 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 SV2BQ7L1I2 683 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 LRRC47Q8N1G4 583 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 COA7Q96BR5 231 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 DEFB129Q9H1M3 183 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 CPVLQ9H3G5 476 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 THAP9Q9H5L6 903 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 LRWD1Q9UFC0 647 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 MYH7BA7E2Y1 1941 aa12.36□□□□□ -0.43
ERGIC3-207ENST00000438317 COL2A1P02458 1487 aaPredicted RBP12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 UNCXA6NJT0 531 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 N4BP3O15049 544 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 KLRC4O43908 158 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 PLCG1P19174 1290 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 TECP42680 631 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 CLK2P49760 499 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 USP11P51784 963 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 RBM5P52756 815 aaKnown RBP eCLIP12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 COPB1P53618 953 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 CCDC96Q2M329 555 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 TCP11X2Q5H9J9 407 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 CNNM4Q6P4Q7 775 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 TMEM139Q8IV31 216 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 FAM114A1Q8IWE2 563 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 REXO1L1PQ8IX06 675 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 TMEM106CQ9BVX2 250 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 SRRTQ9BXP5 876 aaKnown RBP12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 PSTPIP2Q9H939 334 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 PHLPP2Q6ZVD8 1323 aa12.35□□□□□ -0.43
ERGIC3-207ENST00000438317 RANBP2P49792 3224 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 KCNJ18B7U540 433 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 TEX33O43247 280 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 SLU7O95391 586 aaKnown RBP12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 CCNE1P24864 410 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 TXKP42681 527 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 ATP2B2Q01814 1243 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 NFIAQ12857 509 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 PSMD2Q13200 908 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 KCNJ12Q14500 433 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 SEPT2Q15019 361 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 KRT31Q15323 416 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 HSP90AA4PQ58FG1 418 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 KRT79Q5XKE5 535 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 SLFN13Q68D06 897 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 TMTC1Q8IUR5 882 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 ZSCAN29Q8IWY8 852 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 SMYD4Q8IYR2 804 aaPredicted RBP12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 ANKRD7Q92527 254 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 CDK5RAP3Q96JB5 506 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 L2HGDHQ9H9P8 463 aa12.34□□□□□ -0.43
ERGIC3-207ENST00000438317 EXOC1Q9NV70 894 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms