RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 BRDTQ58F21 947 aaPredicted RBP18.79■□□□□ 0.6
CTSD-205ENST00000438213 IL27Q8NEV9 243 aa18.79■□□□□ 0.6
CTSD-205ENST00000438213 C6orf50Q9HD87 102 aa18.79■□□□□ 0.6
CTSD-205ENST00000438213 NR2E3Q9Y5X4 410 aa18.79■□□□□ 0.6
CTSD-205ENST00000438213 GNA11P29992 359 aa18.78■□□□□ 0.6
CTSD-205ENST00000438213 SCRN1Q12765 414 aa18.78■□□□□ 0.6
CTSD-205ENST00000438213 MCTP2Q6DN12 878 aa18.78■□□□□ 0.6
CTSD-205ENST00000438213 FERMT2Q96AC1 680 aa18.78■□□□□ 0.6
CTSD-205ENST00000438213 SH3GLB2Q9NR46 395 aa18.78■□□□□ 0.6
CTSD-205ENST00000438213 ESYT2A0FGR8 921 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 PPFIA3O75145 1194 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 DEXIO95424 95 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 TGFB3P10600 412 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 ACLYP53396 1101 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 FSCN1Q16658 493 aaKnown RBP18.77■□□□□ 0.6
CTSD-205ENST00000438213 UBE2SQ16763 222 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 GNPTABQ3T906 1256 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 PCNX4Q63HM2 1172 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 CCSAPQ6IQ19 270 aaPredicted RBP18.77■□□□□ 0.6
CTSD-205ENST00000438213 TYW1BQ6NUM6 668 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 CCDC62Q6P9F0 684 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 CCDC148Q8NFR7 591 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 OR6J1Q8NGC5 347 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 BICD2Q8TD16 824 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 VTI1AQ96AJ9 217 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 ZMYND12Q9H0C1 365 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 PCDHA6Q9UN73 950 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 LIMCH1Q9UPQ0 1083 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 PCDHA8Q9Y5H6 950 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 MRVI1Q9Y6F6 885 aa18.77■□□□□ 0.6
CTSD-205ENST00000438213 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
CTSD-205ENST00000438213 CPT1AP50416 773 aa18.76■□□□□ 0.59
CTSD-205ENST00000438213 BEX3Q00994 111 aa18.76■□□□□ 0.59
CTSD-205ENST00000438213 ME3Q16798 604 aa18.76■□□□□ 0.59
CTSD-205ENST00000438213 TMEM63BQ5T3F8 832 aa18.76■□□□□ 0.59
CTSD-205ENST00000438213 SLC39A5Q6ZMH5 540 aa18.76■□□□□ 0.59
CTSD-205ENST00000438213 IL31RAQ8NI17 732 aa18.76■□□□□ 0.59
CTSD-205ENST00000438213 GLT1D1Q96MS3 346 aa18.76■□□□□ 0.59
CTSD-205ENST00000438213 KIF2CQ99661 725 aa18.76■□□□□ 0.59
CTSD-205ENST00000438213 DDX41Q9UJV9 622 aaKnown RBP18.76■□□□□ 0.59
CTSD-205ENST00000438213 MYADML2A6NDP7 307 aa18.75■□□□□ 0.59
CTSD-205ENST00000438213 CTAGE5O15320 804 aa18.75■□□□□ 0.59
CTSD-205ENST00000438213 CABYRO75952 493 aa18.75■□□□□ 0.59
CTSD-205ENST00000438213 GH1P01241 217 aa18.75■□□□□ 0.59
CTSD-205ENST00000438213 ASGR1P07306 291 aa18.75■□□□□ 0.59
CTSD-205ENST00000438213 ATN1P54259 1190 aaPredicted RBP18.75■□□□□ 0.59
CTSD-205ENST00000438213 AP3B2Q13367 1082 aa18.75■□□□□ 0.59
CTSD-205ENST00000438213 RABEP1Q15276 862 aa18.75■□□□□ 0.59
CTSD-205ENST00000438213 LY6KQ17RY6 165 aa18.75■□□□□ 0.59
CTSD-205ENST00000438213 NLRX1Q86UT6 975 aa18.75■□□□□ 0.59
CTSD-205ENST00000438213 FAM177A1Q8N128 213 aaPredicted RBP18.75■□□□□ 0.59
CTSD-205ENST00000438213 ZSCAN31Q96LW9 406 aaPredicted RBP18.75■□□□□ 0.59
CTSD-205ENST00000438213 ELP1O95163 1332 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 FRMPD3Q5JV73 1810 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 A0A1W2PQ45 241 aaPredicted RBP18.74■□□□□ 0.59
CTSD-205ENST00000438213 A0A1W2PQY0 241 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 KPNA6O60684 536 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 RGS20O76081 388 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 ARIH2O95376 493 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 XBP1P17861 261 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 NLRP5P59047 1200 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 IRX5P78411 483 aaPredicted RBP18.74■□□□□ 0.59
CTSD-205ENST00000438213 MRPS9P82933 396 aaKnown RBP18.74■□□□□ 0.59
CTSD-205ENST00000438213 LAMC2Q13753 1193 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 LRRC26Q2I0M4 334 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 NECAB1Q8N987 351 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 WASF1Q92558 559 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 POLR3EQ9NVU0 708 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 RTEL1Q9NZ71 1219 aa18.74■□□□□ 0.59
CTSD-205ENST00000438213 ICAM3P32942 547 aa18.73■□□□□ 0.59
CTSD-205ENST00000438213 C1orf53Q5VUE5 145 aa18.73■□□□□ 0.59
CTSD-205ENST00000438213 DHX37Q8IY37 1157 aaKnown RBP18.73■□□□□ 0.59
CTSD-205ENST00000438213 REXO1Q8N1G1 1221 aaKnown RBP18.73■□□□□ 0.59
CTSD-205ENST00000438213 COPS5Q92905 334 aa18.73■□□□□ 0.59
CTSD-205ENST00000438213 GTF3C6Q969F1 213 aa18.73■□□□□ 0.59
CTSD-205ENST00000438213 ZFP91Q96JP5 570 aaPredicted RBP18.73■□□□□ 0.59
CTSD-205ENST00000438213 CDHR1Q96JP9 859 aa18.73■□□□□ 0.59
CTSD-205ENST00000438213 INPP4AQ96PE3 977 aaPredicted RBP18.73■□□□□ 0.59
CTSD-205ENST00000438213 BACH2Q9BYV9 841 aa18.73■□□□□ 0.59
CTSD-205ENST00000438213 VPS54Q9P1Q0 977 aa18.73■□□□□ 0.59
CTSD-205ENST00000438213 A6NJR5 290 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 SPATA31C2B4DYI2 1134 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 MAFGO15525 162 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 FIBPO43427 364 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 ST18O60284 1047 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 PTGS1P23219 599 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 CLK2P49760 499 aaKnown RBP18.72■□□□□ 0.59
CTSD-205ENST00000438213 JAKMIP3Q5VZ66 844 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 GALNT17Q6IS24 598 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 TBC1D32Q96NH3 1257 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 SEZ6LQ9BYH1 1024 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 ANO3Q9BYT9 981 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 ORC3Q9UBD5 711 aaPredicted RBP18.72■□□□□ 0.59
CTSD-205ENST00000438213 STK36Q9NRP7 1315 aa18.72■□□□□ 0.59
CTSD-205ENST00000438213 RTP1P59025 263 aa18.71■□□□□ 0.59
CTSD-205ENST00000438213 NEDD9Q14511 834 aa18.71■□□□□ 0.59
CTSD-205ENST00000438213 SNX17Q15036 470 aa18.71■□□□□ 0.59
CTSD-205ENST00000438213 CELF3Q5SZQ8 465 aaKnown RBP18.71■□□□□ 0.59
CTSD-205ENST00000438213 CXCL17Q6UXB2 119 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms