RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 PGK2P07205 417 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 CCL5P13501 91 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
SNHG3-202ENST00000437681 TRAPPC10P48553 1259 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 SAFBQ15424 915 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNHG3-202ENST00000437681 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 TAAR1Q96RJ0 339 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 COL20A1Q9P218 1284 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 UBIAD1Q9Y5Z9 338 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 NFASCO94856 1347 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 KRT2P35908 639 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 GJA8P48165 433 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 RAB11FIP4Q86YS3 637 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 CMTR1Q8N1G2 835 aaKnown RBP13.11□□□□□ -0.31
SNHG3-202ENST00000437681 IPO4Q8TEX9 1081 aaKnown RBP13.11□□□□□ -0.31
SNHG3-202ENST00000437681 ANO3Q9BYT9 981 aa13.11□□□□□ -0.31
SNHG3-202ENST00000437681 MORC2Q9Y6X9 1032 aaPredicted RBP13.11□□□□□ -0.31
SNHG3-202ENST00000437681 FIBPO43427 364 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 GJA9P57773 515 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 BECN1Q14457 450 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 DUSP28Q4G0W2 176 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 FAM184AQ8NB25 1140 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 ARRDC4Q8NCT1 418 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 FBXO18Q8NFZ0 1043 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 GPKOWQ92917 476 aaPredicted RBP eCLIP13.1□□□□□ -0.316e-64■□□□□ 10.4
SNHG3-202ENST00000437681 ABHD8Q96I13 439 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 NPY5RQ15761 445 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 CCL14Q16627 93 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 TNS4Q8IZW8 715 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 NECAB1Q8N987 351 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
SNHG3-202ENST00000437681 SMC3Q9UQE7 1217 aa13.1□□□□□ -0.31
SNHG3-202ENST00000437681 SPATA31C2B4DYI2 1134 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 ZEB2O60315 1214 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 CABYRO75952 493 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 HOXD8P13378 290 aaPredicted RBP13.09□□□□□ -0.31
SNHG3-202ENST00000437681 Q4G0T1 1027 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 PPP4R3AQ6IN85 833 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 TNFRSF25Q93038 417 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 C8orf76Q96K31 380 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 JADE2Q9NQC1 790 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 MYH7BA7E2Y1 1941 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 TBX3O15119 743 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 SGPL1O95470 568 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 NEDD9Q14511 834 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 COL13A1Q5TAT6 717 aaPredicted RBP13.09□□□□□ -0.31
SNHG3-202ENST00000437681 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 FAM43BQ6ZT52 329 aaPredicted RBP13.09□□□□□ -0.31
SNHG3-202ENST00000437681 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 SPC25Q9HBM1 224 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 GNEQ9Y223 722 aaKnown RBP13.09□□□□□ -0.31
SNHG3-202ENST00000437681 RARBP10826 455 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 U2AF2P26368 475 aaKnown RBP eCLIP13.09□□□□□ -0.312e-12■■□□□ 11.6
SNHG3-202ENST00000437681 NONOQ15233 471 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNHG3-202ENST00000437681 TRPV1Q8NER1 839 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 MXRA8Q9BRK3 442 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 VPS54Q9P1Q0 977 aa13.09□□□□□ -0.31
SNHG3-202ENST00000437681 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 ELNP15502 786 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 BRDTQ58F21 947 aaPredicted RBP13.08□□□□□ -0.32
SNHG3-202ENST00000437681 C1orf53Q5VUE5 145 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 KLHDC9Q8NEP7 349 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 TBC1D5Q92609 795 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
SNHG3-202ENST00000437681 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.32
SNHG3-202ENST00000437681 DNM1LO00429 736 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 MEIS1O00470 390 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
SNHG3-202ENST00000437681 LHX8Q68G74 356 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 KRT40Q6A162 431 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 PCSK9Q8NBP7 692 aaKnown RBP13.08□□□□□ -0.32
SNHG3-202ENST00000437681 RDM1Q8NG50 284 aa13.08□□□□□ -0.32
SNHG3-202ENST00000437681 MCM3APO60318 1980 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 GH1P01241 217 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 SLC4A3P48751 1232 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 RGS19P49795 217 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 ARHGAP4P98171 946 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 TNFAIP2Q03169 654 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 STK24Q9Y6E0 443 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 SLC26A4O43511 780 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 CYP2C19P33261 490 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 CPT1AP50416 773 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 PTPN11Q06124 597 aaPredicted RBP13.07□□□□□ -0.32
SNHG3-202ENST00000437681 CEP55Q53EZ4 464 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 BRAPQ7Z569 592 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 SH3TC2Q8TF17 1288 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 UNC93B1Q9H1C4 597 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 DDX41Q9UJV9 622 aaKnown RBP13.07□□□□□ -0.32
SNHG3-202ENST00000437681 PHF24Q9UPV7 400 aa13.07□□□□□ -0.32
SNHG3-202ENST00000437681 CCDC194A0A1B0GVG4 234 aa13.06□□□□□ -0.32
SNHG3-202ENST00000437681 JAK2O60674 1132 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms