RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 GBF1Q92538 1859 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 F2P00734 622 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 IGHDP01880 384 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 PARP1P09874 1014 aaKnown RBP12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ACTN1P12814 892 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 TAP1Q03518 808 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 CCDC85BQ15834 202 aaPredicted RBP12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 PTGISQ16647 500 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 LY6KQ17RY6 165 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 GDF6Q6KF10 455 aaPredicted RBP12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 SEPT14Q6ZU15 432 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 HERC6Q8IVU3 1022 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 RMDN3Q96TC7 470 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 DIAPH3Q9NSV4 1193 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 GTF2IRD1Q9UHL9 959 aa12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 DDX41Q9UJV9 622 aaKnown RBP12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 MRPL11Q9Y3B7 192 aaKnown RBP12.79□□□□□ -0.36
SPTLC1P4-201ENST00000435997 HAS3O00219 553 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 HIP1O00291 1037 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 PPP1R11O60927 126 aaPredicted RBP12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 CXCL10P02778 98 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 SEC23AQ15436 765 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 STXBP2Q15833 593 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 IMMTQ16891 758 aaKnown RBP12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 SLC35G1Q2M3R5 365 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 TRAF7Q6Q0C0 670 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 FBXO11Q86XK2 927 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 PPTC7Q8NI37 304 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 UHRF1Q96T88 793 aaPredicted RBP12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 RWDD1Q9H446 243 aaPredicted RBP12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 PXMP2Q9NR77 195 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 MTCH2Q9Y6C9 303 aa12.78□□□□□ -0.36
SPTLC1P4-201ENST00000435997 LPXNO60711 386 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 EIF3JO75822 258 aaKnown RBP12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 RGS20O76081 388 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PARNO95453 639 aaKnown RBP12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 SELPP16109 830 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 WDR5P61964 334 aaKnown RBP12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 MKRN4PQ13434 485 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 DGKDQ16760 1214 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TRIM71Q2Q1W2 868 aaKnown RBP12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 LRRC8DQ7L1W4 858 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 RETREG2Q8NC44 543 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KRT23Q9C075 422 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CNNM2Q9H8M5 875 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 NOD1Q9Y239 953 aa12.77□□□□□ -0.37
SPTLC1P4-201ENST00000435997 SCN5AQ14524 2016 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 RFXAPO00287 272 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 NBNO60934 754 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 NR3C2P08235 984 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CKBP12277 381 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 BMP1P13497 986 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 EIF2AK2P19525 551 aaKnown RBP12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CASTP20810 708 aaKnown RBP12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 ARHGEF16Q5VV41 709 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 STOX1Q6ZVD7 989 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 SPRED2Q7Z698 418 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CCDC155Q8N6L0 562 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PDCD2LQ9BRP1 358 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 UBAC1Q9BSL1 405 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KATNAL1Q9BW62 490 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 AMNQ9BXJ7 453 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 MAP3K20Q9NYL2 800 aaKnown RBP12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 MAD2L2Q9UI95 211 aa12.76□□□□□ -0.37
SPTLC1P4-201ENST00000435997 LCHNA4D1U4 455 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 ZBTB5O15062 677 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 REV3LO60673 3130 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 ZNF286BP0CG31 522 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 GSPT1P15170 499 aaKnown RBP12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 HOXC8P31273 242 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PSEN2P49810 448 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TFF2Q03403 129 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 MYO9BQ13459 2157 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 LAMC2Q13753 1193 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 MBTPS1Q14703 1052 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 MFSD10Q14728 455 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 FRMPD4Q14CM0 1322 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TCTN1Q2MV58 587 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KRT40Q6A162 431 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CNKSR3Q6P9H4 555 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CYB5R4Q7L1T6 521 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 SAMD3Q8N6K7 520 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TET1Q8NFU7 2136 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 IL31RAQ8NI17 732 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 WNT8BQ93098 351 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 HDAC6Q9UBN7 1215 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 MRVI1Q9Y6F6 885 aa12.75□□□□□ -0.37
SPTLC1P4-201ENST00000435997 NCOR1O75376 2440 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PRRC2BQ5JSZ5 2229 aaKnown RBP12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KIF28PB7ZC32 967 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KLRF2D3W0D1 207 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 GJB5O95377 273 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CFBP00751 764 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms