RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 TTLL3Q9Y4R7 772 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 MXRA7P84157 204 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 U2AF1L4Q8WU68 220 aaKnown RBP17.12■□□□□ 0.33
NEDD4-202ENST00000435532 DISC1Q9NRI5 854 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 FEZ2Q9UHY8 353 aaPredicted RBP17.12■□□□□ 0.33
NEDD4-202ENST00000435532 PTK2Q05397 1052 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 SLFN12LQ6IEE8 588 aa17.12■□□□□ 0.33
NEDD4-202ENST00000435532 RSBN1LQ6PCB5 846 aaPredicted RBP17.12■□□□□ 0.33
NEDD4-202ENST00000435532 CUL4BQ13620 913 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 TAF1CQ15572 869 aaPredicted RBP17.11■□□□□ 0.33
NEDD4-202ENST00000435532 URGCPQ8TCY9 931 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 ELP3Q9H9T3 547 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 SLC39A2Q9NP94 309 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 FAM207AQ9NSI2 230 aaPredicted RBP17.11■□□□□ 0.33
NEDD4-202ENST00000435532 TBC1D22BQ9NU19 505 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 MTX1Q13505 466 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 LGSNQ5TDP6 509 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 KCNV1Q6PIU1 500 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 PPM1KQ8N3J5 372 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 PRPF38AQ8NAV1 312 aaKnown RBP17.11■□□□□ 0.33
NEDD4-202ENST00000435532 CAMTA2O94983 1202 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 UBE2SQ16763 222 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 SELENOSQ9BQE4 189 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 RPF1Q9H9Y2 349 aaKnown RBP17.11■□□□□ 0.33
NEDD4-202ENST00000435532 C19orf81C9J6K1 198 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 MMP1P03956 469 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 RSRC2Q7L4I2 434 aaKnown RBP17.11■□□□□ 0.33
NEDD4-202ENST00000435532 PGBD1Q96JS3 809 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 DPEP1P16444 411 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 MTMR1Q13613 665 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 UAP1Q16222 522 aaPredicted RBP17.11■□□□□ 0.33
NEDD4-202ENST00000435532 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 ELMOD1Q8N336 334 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 USP28Q96RU2 1077 aa17.11■□□□□ 0.33
NEDD4-202ENST00000435532 HOXA13P31271 388 aaPredicted RBP17.1■□□□□ 0.33
NEDD4-202ENST00000435532 GEN1Q17RS7 908 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 PEX26Q7Z412 305 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 MTFR1LQ9H019 292 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 RFX7Q2KHR2 1363 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 MED7O43513 233 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 KRT10P13645 584 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 ERCC3P19447 782 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 RASGRP4Q8TDF6 673 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 PCDHB4Q9Y5E5 795 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.1■□□□□ 0.33
NEDD4-202ENST00000435532 LMNB1P20700 586 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 PPANQ9NQ55 473 aaKnown RBP17.1■□□□□ 0.33
NEDD4-202ENST00000435532 TKFCQ3LXA3 575 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 NLRC4Q9NPP4 1024 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 RIC8AQ9NPQ8 531 aa17.1■□□□□ 0.33
NEDD4-202ENST00000435532 XPAP23025 273 aaPredicted RBP17.09■□□□□ 0.33
NEDD4-202ENST00000435532 MARK3P27448 753 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 RPS6KA1Q15418 735 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 ZNF34Q8IZ26 560 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 GJA10Q969M2 543 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 TRIM11Q96F44 468 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 FAM49AQ9H0Q0 323 aaPredicted RBP17.09■□□□□ 0.33
NEDD4-202ENST00000435532 AMFRQ9UKV5 643 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 RNF8O76064 485 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 KRT76Q01546 638 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 BRD1O95696 1058 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 PHKA2P46019 1235 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 ARPP19P56211 112 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 RSAD2Q8WXG1 361 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 SMC6Q96SB8 1091 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.09■□□□□ 0.33
NEDD4-202ENST00000435532 KIAA1468Q9P260 1216 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 ASIC3Q9UHC3 531 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 POLR3GO15318 223 aaPredicted RBP17.09■□□□□ 0.33
NEDD4-202ENST00000435532 ECE1P42892 770 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 ZBTB16Q05516 673 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 CBX8Q9HC52 389 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 A6NJR5 290 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 DSTYKQ6XUX3 929 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 THEM5Q8N1Q8 247 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 FAM84BQ96KN1 310 aaPredicted RBP17.09■□□□□ 0.33
NEDD4-202ENST00000435532 ATP6V0A4Q9HBG4 840 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 PARVGQ9HBI0 331 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 SLC8A2Q9UPR5 921 aa17.09■□□□□ 0.33
NEDD4-202ENST00000435532 KBTBD13C9JR72 458 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 ENTPD3O75355 529 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 NSFP46459 744 aaKnown RBP17.08■□□□□ 0.33
NEDD4-202ENST00000435532 ITKQ08881 620 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 ARMCX2Q7L311 632 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 CROCCP2Q86T23 111 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 MTA3Q9BTC8 594 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 STAT3P40763 770 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 SNAP25P60880 206 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 TGFB2P61812 414 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 SCARF1Q14162 830 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 EPHA10Q5JZY3 1008 aa17.08■□□□□ 0.33
NEDD4-202ENST00000435532 TRMT44Q8IYL2 757 aaKnown RBP17.08■□□□□ 0.33
NEDD4-202ENST00000435532 ADAMTS13Q76LX8 1427 aa17.08■□□□□ 0.32
NEDD4-202ENST00000435532 LDHAP00338 332 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms