RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 WWC2Q6AWC2 1192 aa20.87■□□□□ 0.93
CLOCK-203ENST00000435527 SH3RF1Q7Z6J0 888 aa20.87■□□□□ 0.93
CLOCK-203ENST00000435527 SLC43A3Q8NBI5 491 aa20.87■□□□□ 0.93
CLOCK-203ENST00000435527 SMARCC2Q8TAQ2 1214 aa20.87■□□□□ 0.93
CLOCK-203ENST00000435527 GPKOWQ92917 476 aaPredicted RBP eCLIP20.87■□□□□ 0.934e-7■■□□□ 14.1
CLOCK-203ENST00000435527 ZFP91Q96JP5 570 aaPredicted RBP20.87■□□□□ 0.93
CLOCK-203ENST00000435527 UPF3BQ9BZI7 483 aaKnown RBP20.87■□□□□ 0.93
CLOCK-203ENST00000435527 NID2Q14112 1375 aa20.86■□□□□ 0.93
CLOCK-203ENST00000435527 GRIN2DO15399 1336 aa20.86■□□□□ 0.93
CLOCK-203ENST00000435527 A0A0U1RQG5 324 aaPredicted RBP20.86■□□□□ 0.93
CLOCK-203ENST00000435527 TRIM43BA6NCK2 446 aa20.86■□□□□ 0.93
CLOCK-203ENST00000435527 SEC24BO95487 1268 aa20.86■□□□□ 0.93
CLOCK-203ENST00000435527 MRPS9P82933 396 aaKnown RBP20.86■□□□□ 0.93
CLOCK-203ENST00000435527 TYW1BQ6NUM6 668 aa20.86■□□□□ 0.93
CLOCK-203ENST00000435527 HEATR3Q7Z4Q2 680 aa20.86■□□□□ 0.93
CLOCK-203ENST00000435527 CUL5Q93034 780 aa20.86■□□□□ 0.93
CLOCK-203ENST00000435527 TRIM43Q96BQ3 446 aaPredicted RBP20.86■□□□□ 0.93
CLOCK-203ENST00000435527 PDLIM7Q9NR12 457 aa20.86■□□□□ 0.93
CLOCK-203ENST00000435527 PQBP1O60828 265 aaKnown RBP20.85■□□□□ 0.93
CLOCK-203ENST00000435527 CCND2P30279 289 aa20.85■□□□□ 0.93
CLOCK-203ENST00000435527 CPT1AP50416 773 aa20.85■□□□□ 0.93
CLOCK-203ENST00000435527 ARHGAP1Q07960 439 aa20.85■□□□□ 0.93
CLOCK-203ENST00000435527 FAAP100Q0VG06 881 aa20.85■□□□□ 0.93
CLOCK-203ENST00000435527 NTRK3Q16288 839 aa20.85■□□□□ 0.93
CLOCK-203ENST00000435527 IL17RAQ96F46 866 aa20.85■□□□□ 0.93
CLOCK-203ENST00000435527 POLR3EQ9NVU0 708 aa20.85■□□□□ 0.93
CLOCK-203ENST00000435527 GH1P01241 217 aa20.84■□□□□ 0.93
CLOCK-203ENST00000435527 ANAPC15P60006 121 aa20.84■□□□□ 0.93
CLOCK-203ENST00000435527 PURAQ00577 322 aaKnown RBP20.84■□□□□ 0.93
CLOCK-203ENST00000435527 ITGA7Q13683 1181 aa20.84■□□□□ 0.93
CLOCK-203ENST00000435527 PDRG1Q9NUG6 133 aa20.84■□□□□ 0.93
CLOCK-203ENST00000435527 PRKAG2Q9UGJ0 569 aa20.84■□□□□ 0.93
CLOCK-203ENST00000435527 MRVI1Q9Y6F6 885 aa20.84■□□□□ 0.93
CLOCK-203ENST00000435527 DCDC2CA8MYV0 355 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 STXBP3O00186 592 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 KIAA0355O15063 1070 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 PRPF3O43395 683 aaKnown RBP20.83■□□□□ 0.93
CLOCK-203ENST00000435527 CLTBP09497 229 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 TGFB3P10600 412 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 PSMC6P62333 389 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 MDM2Q00987 491 aaPredicted RBP20.83■□□□□ 0.93
CLOCK-203ENST00000435527 SP2Q02086 613 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 PKN1Q16512 942 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 UBE2SQ16763 222 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 PFKFB3Q16875 520 aaPredicted RBP20.83■□□□□ 0.93
CLOCK-203ENST00000435527 KCNV1Q6PIU1 500 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 AFG1LQ8WV93 481 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 ZNF274Q96GC6 653 aaPredicted RBP20.83■□□□□ 0.93
CLOCK-203ENST00000435527 LARP6Q9BRS8 491 aaKnown RBP20.83■□□□□ 0.93
CLOCK-203ENST00000435527 ALDH8A1Q9H2A2 487 aaPredicted RBP20.83■□□□□ 0.93
CLOCK-203ENST00000435527 PRDM5Q9NQX1 630 aaPredicted RBP20.83■□□□□ 0.93
CLOCK-203ENST00000435527 BARHL2Q9NY43 387 aa20.83■□□□□ 0.93
CLOCK-203ENST00000435527 hCG_1984214I3L0E3 225 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 KPNA6O60684 536 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 EIF5BO60841 1220 aaKnown RBP20.82■□□□□ 0.92
CLOCK-203ENST00000435527 STAM2O75886 525 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 MYL3P08590 195 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 ITGB8P26012 769 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 ICAM3P32942 547 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 NAPAP54920 295 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 CCT2P78371 535 aaKnown RBP20.82■□□□□ 0.92
CLOCK-203ENST00000435527 BRDTQ58F21 947 aaPredicted RBP20.82■□□□□ 0.92
CLOCK-203ENST00000435527 PCNX4Q63HM2 1172 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 PPP1R18Q6NYC8 613 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 XRRA1Q6P2D8 792 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 FAM126BQ8IXS8 530 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 ZNF713Q8N859 430 aaPredicted RBP20.82■□□□□ 0.92
CLOCK-203ENST00000435527 EMID1Q96A84 441 aaPredicted RBP20.82■□□□□ 0.92
CLOCK-203ENST00000435527 INPP4AQ96PE3 977 aaPredicted RBP20.82■□□□□ 0.92
CLOCK-203ENST00000435527 SEZ6LQ9BYH1 1024 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 RIC8AQ9NPQ8 531 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 TMEM39AQ9NV64 488 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 RTEL1Q9NZ71 1219 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 PCDHA6Q9UN73 950 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 PCDHA8Q9Y5H6 950 aa20.82■□□□□ 0.92
CLOCK-203ENST00000435527 MROH7Q68CQ1 1323 aa20.81■□□□□ 0.92
CLOCK-203ENST00000435527 A0A1W2PPC1 479 aa20.81■□□□□ 0.92
CLOCK-203ENST00000435527 SMCO2A6NFE2 343 aa20.81■□□□□ 0.92
CLOCK-203ENST00000435527 CD4P01730 458 aa20.81■□□□□ 0.92
CLOCK-203ENST00000435527 IFNAR1P17181 557 aa20.81■□□□□ 0.92
CLOCK-203ENST00000435527 LAMC2Q13753 1193 aa20.81■□□□□ 0.92
CLOCK-203ENST00000435527 MYSM1Q5VVJ2 828 aa20.81■□□□□ 0.92
CLOCK-203ENST00000435527 TEX2Q8IWB9 1127 aa20.81■□□□□ 0.92
CLOCK-203ENST00000435527 MTG1Q9BT17 334 aaPredicted RBP20.81■□□□□ 0.92
CLOCK-203ENST00000435527 NCOA5Q9HCD5 579 aaKnown RBP20.81■□□□□ 0.92
CLOCK-203ENST00000435527 TRIOBPQ9H2D6 2365 aa20.81■□□□□ 0.92
CLOCK-203ENST00000435527 RANBP2P49792 3224 aaKnown RBP20.81■□□□□ 0.92
CLOCK-203ENST00000435527 SPATA31C2B4DYI2 1134 aa20.8■□□□□ 0.92
CLOCK-203ENST00000435527 SCG2P13521 617 aa20.8■□□□□ 0.92
CLOCK-203ENST00000435527 SEMA3FQ13275 785 aa20.8■□□□□ 0.92
CLOCK-203ENST00000435527 CELF3Q5SZQ8 465 aaKnown RBP20.8■□□□□ 0.92
CLOCK-203ENST00000435527 DHX37Q8IY37 1157 aaKnown RBP20.8■□□□□ 0.92
CLOCK-203ENST00000435527 BADQ92934 168 aa20.8■□□□□ 0.92
CLOCK-203ENST00000435527 PHKBQ93100 1093 aa20.8■□□□□ 0.92
CLOCK-203ENST00000435527 LBHD1Q9BQE6 289 aaPredicted RBP20.8■□□□□ 0.92
CLOCK-203ENST00000435527 UBE2OQ9C0C9 1292 aaKnown RBP20.8■□□□□ 0.92
CLOCK-203ENST00000435527 BCAS3Q9H6U6 928 aa20.8■□□□□ 0.92
CLOCK-203ENST00000435527 TBX21Q9UL17 535 aa20.8■□□□□ 0.92
CLOCK-203ENST00000435527 KIAA1217Q5T5P2 1943 aa20.8■□□□□ 0.92
CLOCK-203ENST00000435527 MMP3P08254 477 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms