RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 CLIC6Q96NY7 704 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 MTMR9Q96QG7 549 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 CSRNP2Q9H175 543 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 KCNMB3Q9NPA1 279 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 A1CFQ9NQ94 594 aaKnown RBP12.84□□□□□ -0.35
PCOTH-203ENST00000435039 DACT1Q9NYF0 836 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 FAM13BQ9NYF5 915 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 COL20A1Q9P218 1284 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 MRVI1Q9Y6F6 885 aa12.84□□□□□ -0.35
PCOTH-203ENST00000435039 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
PCOTH-203ENST00000435039 NR1I2O75469 434 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 TBC1D8O95759 1140 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 TM4SF4P48230 202 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 FXR2P51116 673 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCOTH-203ENST00000435039 NDUFA8P51970 172 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 ERVK-9P63128 1117 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 ERVK-24P63145 666 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 GRIN1Q05586 938 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 TMEM266Q2M3C6 531 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 PCNX4Q63HM2 1172 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 XRRA1Q6P2D8 792 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 FMR1NBQ8N0W7 255 aaPredicted RBP12.83□□□□□ -0.36
PCOTH-203ENST00000435039 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 ZNF296Q8WUU4 475 aaPredicted RBP12.83□□□□□ -0.36
PCOTH-203ENST00000435039 LENG9Q96B70 501 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 PYM1Q9BRP8 204 aaKnown RBP12.83□□□□□ -0.36
PCOTH-203ENST00000435039 MOV10L1Q9BXT6 1211 aaKnown RBP12.83□□□□□ -0.36
PCOTH-203ENST00000435039 RAB34Q9BZG1 259 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 NUP62CLQ9H1M0 184 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 CLSTN2Q9H4D0 955 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 CYP39A1Q9NYL5 469 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.36
PCOTH-203ENST00000435039 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 A0A1B0GVL5 298 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 CYP2C8P10632 490 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 TXLNAP40222 546 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 CCNA1P78396 465 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 SREBF2Q12772 1141 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 SNW1Q13573 536 aaKnown RBP12.82□□□□□ -0.36
PCOTH-203ENST00000435039 BAATQ14032 418 aaPredicted RBP12.82□□□□□ -0.36
PCOTH-203ENST00000435039 FAM110CQ1W6H9 321 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 ZSCAN23Q3MJ62 389 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 TPRNQ4KMQ1 711 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 NIPA1Q7RTP0 329 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 SLFN12Q8IYM2 578 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 ETNPPLQ8TBG4 499 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 SYMPKQ92797 1274 aaKnown RBP12.82□□□□□ -0.36
PCOTH-203ENST00000435039 MROH8Q9H579 483 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 TXNRD2Q9NNW7 524 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 PXMP2Q9NR77 195 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 RBPJLQ9UBG7 517 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 ADGRA2Q96PE1 1338 aa12.82□□□□□ -0.36
PCOTH-203ENST00000435039 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 CTAGE5O15320 804 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 LETM1O95202 739 aaPredicted RBP12.81□□□□□ -0.36
PCOTH-203ENST00000435039 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 BCRP11274 1271 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 ERCC3P19447 782 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 ZNF76P36508 570 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 SYKP43405 635 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 INHBEP58166 350 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 IL17AQ16552 155 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 CEP55Q53EZ4 464 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 NCAPG2Q86XI2 1143 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 ANKRD35Q8N283 1001 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 IGSF22Q8N9C0 903 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 TIGD1Q96MW7 591 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 RMDN3Q96TC7 470 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 PTPN18Q99952 460 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 PDCD2LQ9BRP1 358 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 KCNH3Q9ULD8 1083 aa12.81□□□□□ -0.36
PCOTH-203ENST00000435039 IGF2BP3O00425 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCOTH-203ENST00000435039 SLC26A4O43511 780 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 STAM2O75886 525 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 EIF2AK2P19525 551 aaKnown RBP12.8□□□□□ -0.36
PCOTH-203ENST00000435039 CCND2P30279 289 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 PGM5Q15124 567 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 PKN2Q16513 984 aaKnown RBP12.8□□□□□ -0.36
PCOTH-203ENST00000435039 PRR16Q569H4 304 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 ARHGEF16Q5VV41 709 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 RBM43Q6ZSC3 357 aaKnown RBP12.8□□□□□ -0.36
PCOTH-203ENST00000435039 GPRC5AQ8NFJ5 357 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 IL31RAQ8NI17 732 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
PCOTH-203ENST00000435039 HAS1Q92839 578 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 FAM20AQ96MK3 541 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 CFHR5Q9BXR6 569 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 USP25Q9UHP3 1055 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 PLXNA1Q9UIW2 1896 aa12.8□□□□□ -0.36
PCOTH-203ENST00000435039 HTTP42858 3142 aa12.79□□□□□ -0.36
PCOTH-203ENST00000435039 LOC102724159A0A0B4J2E5 919 aa12.79□□□□□ -0.36
PCOTH-203ENST00000435039 GPR25O00155 361 aa12.79□□□□□ -0.36
PCOTH-203ENST00000435039 ZNF202O95125 648 aa12.79□□□□□ -0.36
PCOTH-203ENST00000435039 ZNF445P59923 1031 aa12.79□□□□□ -0.36
PCOTH-203ENST00000435039 UBXN2AP68543 259 aa12.79□□□□□ -0.36
PCOTH-203ENST00000435039 PDIA5Q14554 519 aa12.79□□□□□ -0.36
PCOTH-203ENST00000435039 PWP2Q15269 919 aaKnown RBP12.79□□□□□ -0.36
PCOTH-203ENST00000435039 SPECC1Q5M775 1068 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms