RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 HSP90B2PQ58FF3 399 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 RRAGAQ7L523 313 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
CD44-209ENST00000433892 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 GDAP1L1Q96MZ0 367 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 UIMC1Q96RL1 719 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 TSGA10Q9BZW7 698 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 DEF6Q9H4E7 631 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 JMJD4Q9H9V9 463 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 MLXIPQ9HAP2 919 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 CAPN6Q9Y6Q1 641 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 LRRC53A6NM62 1247 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 RIMBP2O15034 1052 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 SERPINB2P05120 415 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 SNHG28P0DPA3 235 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 SLC16A2P36021 539 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 KIF11P52732 1056 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 GABPAQ06546 454 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 ZSCAN26Q16670 478 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 CCDC84Q86UT8 332 aaPredicted RBP13.11□□□□□ -0.31
CD44-209ENST00000433892 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 HINFPQ9BQA5 517 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
CD44-209ENST00000433892 PSD3Q9NYI0 1048 aa13.11□□□□□ -0.31
CD44-209ENST00000433892 USO1O60763 962 aaKnown RBP13.1□□□□□ -0.31
CD44-209ENST00000433892 MOCS3O95396 460 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 LRRC63Q05C16 580 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 C2orf54Q08AI8 447 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 ZNF543Q08ER8 600 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 LRRC55Q6ZSA7 311 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 GSPT2Q8IYD1 628 aaKnown RBP13.1□□□□□ -0.31
CD44-209ENST00000433892 IQCDQ96DY2 449 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 TANGO6Q9C0B7 1094 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 RIC8AQ9NPQ8 531 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 DDX25Q9UHL0 483 aaKnown RBP13.1□□□□□ -0.31
CD44-209ENST00000433892 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 AKR1B10O60218 316 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 MARCH6O60337 910 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 BBOX1O75936 387 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 FGFR1OPO95684 399 aaKnown RBP13.1□□□□□ -0.31
CD44-209ENST00000433892 TTLL1O95922 423 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 GYS1P13807 737 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 MCM3P25205 808 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 EHHADHQ08426 723 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 TRIM58Q8NG06 486 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 HAS1Q92839 578 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 TRERF1Q96PN7 1200 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 SH2D4AQ9H788 454 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 SNX12Q9UMY4 172 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 JRKLQ9Y4A0 524 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 TAF1LQ8IZX4 1826 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 PLIN4Q96Q06 1357 aa13.1□□□□□ -0.31
CD44-209ENST00000433892 IGKV6D-41A0A0C4DH26 115 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
CD44-209ENST00000433892 TACC1O75410 805 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
CD44-209ENST00000433892 SLURP2P0DP57 97 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 MYBL2P10244 700 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 MAP9Q49MG5 647 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 PPP4R3AQ6IN85 833 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 KCTD1Q719H9 257 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 CREG2Q8IUH2 290 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 ANKRD13CQ8N6S4 541 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 COG1Q8WTW3 980 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 BAP1Q92560 729 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 PSMB7Q99436 277 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 ACBD3Q9H3P7 528 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 TBC1D7Q9P0N9 293 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 USP21Q9UK80 565 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 LTBP4Q8N2S1 1624 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 NHSQ6T4R5 1651 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 CAPN2P17655 700 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 CACNA2D4Q7Z3S7 1137 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 MYOCDQ8IZQ8 938 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 CUL5Q93034 780 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 DNAJC19Q96DA6 116 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 TSG101Q99816 390 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 MXD3Q9BW11 206 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 SERPINB13Q9UIV8 391 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 PCDHA12Q9UN75 941 aa13.09□□□□□ -0.31
CD44-209ENST00000433892 ABCB11O95342 1321 aa13.08□□□□□ -0.32
CD44-209ENST00000433892 USP17L10C9JJH3 530 aa13.08□□□□□ -0.32
CD44-209ENST00000433892 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
CD44-209ENST00000433892 CXCR5P32302 372 aa13.08□□□□□ -0.32
CD44-209ENST00000433892 CLK2P49760 499 aaKnown RBP13.08□□□□□ -0.32
CD44-209ENST00000433892 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
CD44-209ENST00000433892 COASYQ13057 564 aa13.08□□□□□ -0.32
CD44-209ENST00000433892 PSMD2Q13200 908 aa13.08□□□□□ -0.32
CD44-209ENST00000433892 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
CD44-209ENST00000433892 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.32
CD44-209ENST00000433892 FGFBP2Q9BYJ0 223 aa13.08□□□□□ -0.32
CD44-209ENST00000433892 LRRC27Q9C0I9 530 aa13.08□□□□□ -0.32
CD44-209ENST00000433892 VIPAS39Q9H9C1 493 aa13.08□□□□□ -0.32
CD44-209ENST00000433892 MED4Q9NPJ6 270 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms