RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 BRCA2P51587 3418 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 ESYT2A0FGR8 921 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 JAK2O60674 1132 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 DUSP11O75319 330 aaKnown RBP17.76■□□□□ 0.43
TREX1-201ENST00000433541 CTDNEP1O95476 244 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 TXNP10599 105 aaKnown RBP17.76■□□□□ 0.43
TREX1-201ENST00000433541 AP3B2Q13367 1082 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 GNPTABQ3T906 1256 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 TAPT1Q6NXT6 567 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 ANKLE1Q8NAG6 615 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 NSUN7Q8NE18 718 aaKnown RBP17.76■□□□□ 0.43
TREX1-201ENST00000433541 ANO3Q9BYT9 981 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 ZMYND12Q9H0C1 365 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 RTEL1Q9NZ71 1219 aa17.76■□□□□ 0.43
TREX1-201ENST00000433541 SYNRGQ9UMZ2 1314 aa17.75■□□□□ 0.43
TREX1-201ENST00000433541 DYNC1LI2O43237 492 aaPredicted RBP17.75■□□□□ 0.43
TREX1-201ENST00000433541 SMPD1P17405 629 aa17.75■□□□□ 0.43
TREX1-201ENST00000433541 ZNF76P36508 570 aa17.75■□□□□ 0.43
TREX1-201ENST00000433541 MCTP2Q6DN12 878 aa17.75■□□□□ 0.43
TREX1-201ENST00000433541 NECAB2Q7Z6G3 386 aa17.75■□□□□ 0.43
TREX1-201ENST00000433541 OR6J1Q8NGC5 347 aa17.75■□□□□ 0.43
TREX1-201ENST00000433541 DIS3LQ8TF46 1054 aaKnown RBP17.75■□□□□ 0.43
TREX1-201ENST00000433541 PAWRQ96IZ0 340 aaKnown RBP17.75■□□□□ 0.43
TREX1-201ENST00000433541 DOCK5Q9H7D0 1870 aa17.75■□□□□ 0.43
TREX1-201ENST00000433541 ADCY6O43306 1168 aa17.74■□□□□ 0.43
TREX1-201ENST00000433541 LRRC41Q15345 812 aa17.74■□□□□ 0.43
TREX1-201ENST00000433541 PCNX4Q63HM2 1172 aa17.74■□□□□ 0.43
TREX1-201ENST00000433541 VSIG10LQ86VR7 867 aa17.74■□□□□ 0.43
TREX1-201ENST00000433541 TEX2Q8IWB9 1127 aa17.74■□□□□ 0.43
TREX1-201ENST00000433541 RASGRP4Q8TDF6 673 aa17.74■□□□□ 0.43
TREX1-201ENST00000433541 BRMS1Q9HCU9 246 aa17.74■□□□□ 0.43
TREX1-201ENST00000433541 KCNJ14Q9UNX9 436 aa17.74■□□□□ 0.43
TREX1-201ENST00000433541 FRMPD4Q14CM0 1322 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 DNM1LO00429 736 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.43
TREX1-201ENST00000433541 SORBS3O60504 671 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 STAM2O75886 525 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 CD2BP2O95400 341 aaKnown RBP17.73■□□□□ 0.43
TREX1-201ENST00000433541 DUSP28Q4G0W2 176 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 BRDTQ58F21 947 aaPredicted RBP17.73■□□□□ 0.43
TREX1-201ENST00000433541 GNASQ5JWF2 1037 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 XRRA1Q6P2D8 792 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 NLRX1Q86UT6 975 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 BLIDQ8IZY5 108 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 VTI1AQ96AJ9 217 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 TMX3Q96JJ7 454 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 LLPHQ9BRT6 129 aaKnown RBP17.73■□□□□ 0.43
TREX1-201ENST00000433541 SENP6Q9GZR1 1112 aaPredicted RBP17.73■□□□□ 0.43
TREX1-201ENST00000433541 C11orf49Q9H6J7 331 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 PCDHA4Q9UN74 947 aa17.73■□□□□ 0.43
TREX1-201ENST00000433541 ZEB2O60315 1214 aa17.72■□□□□ 0.43
TREX1-201ENST00000433541 PTGS1P23219 599 aa17.72■□□□□ 0.43
TREX1-201ENST00000433541 HMGN5P82970 282 aaKnown RBP17.72■□□□□ 0.43
TREX1-201ENST00000433541 BEX3Q00994 111 aa17.72■□□□□ 0.43
TREX1-201ENST00000433541 MLLT1Q03111 559 aaPredicted RBP17.72■□□□□ 0.43
TREX1-201ENST00000433541 ST3GAL1Q11201 340 aa17.72■□□□□ 0.43
TREX1-201ENST00000433541 LY6KQ17RY6 165 aa17.72■□□□□ 0.43
TREX1-201ENST00000433541 KCNV1Q6PIU1 500 aa17.72■□□□□ 0.43
TREX1-201ENST00000433541 COPS5Q92905 334 aa17.72■□□□□ 0.43
TREX1-201ENST00000433541 FERMT2Q96AC1 680 aa17.72■□□□□ 0.43
TREX1-201ENST00000433541 HTATIP2Q9BUP3 242 aa17.72■□□□□ 0.43
TREX1-201ENST00000433541 RBM47A0AV96 593 aaKnown RBP17.71■□□□□ 0.43
TREX1-201ENST00000433541 ARIH2O95376 493 aa17.71■□□□□ 0.43
TREX1-201ENST00000433541 GH1P01241 217 aa17.71■□□□□ 0.43
TREX1-201ENST00000433541 CLK2P49760 499 aaKnown RBP17.71■□□□□ 0.43
TREX1-201ENST00000433541 CPT1AP50416 773 aa17.71■□□□□ 0.43
TREX1-201ENST00000433541 GJA9P57773 515 aa17.71■□□□□ 0.43
TREX1-201ENST00000433541 MRPS9P82933 396 aaKnown RBP17.71■□□□□ 0.43
TREX1-201ENST00000433541 ARHGAP4P98171 946 aa17.71■□□□□ 0.43
TREX1-201ENST00000433541 FSCN1Q16658 493 aaKnown RBP17.71■□□□□ 0.43
TREX1-201ENST00000433541 TMEM63BQ5T3F8 832 aa17.71■□□□□ 0.43
TREX1-201ENST00000433541 GALNT17Q6IS24 598 aa17.71■□□□□ 0.43
TREX1-201ENST00000433541 DHX37Q8IY37 1157 aaKnown RBP17.71■□□□□ 0.43
TREX1-201ENST00000433541 FAM177A1Q8N128 213 aaPredicted RBP17.71■□□□□ 0.43
TREX1-201ENST00000433541 PCSK9Q8NBP7 692 aaKnown RBP17.71■□□□□ 0.43
TREX1-201ENST00000433541 GJB4Q9NTQ9 266 aa17.71■□□□□ 0.43
TREX1-201ENST00000433541 GNEQ9Y223 722 aaKnown RBP17.71■□□□□ 0.43
TREX1-201ENST00000433541 KIF3AQ9Y496 699 aa17.71■□□□□ 0.43
TREX1-201ENST00000433541 CCDC194A0A1B0GVG4 234 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 MYADML2A6NDP7 307 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 FIBPO43427 364 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 ADAMTS4O75173 837 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 FDPSP14324 419 aaKnown RBP17.7■□□□□ 0.42
TREX1-201ENST00000433541 SREBF1P36956 1147 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 MTMR1Q13613 665 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 GNL2Q13823 731 aaKnown RBP17.7■□□□□ 0.42
TREX1-201ENST00000433541 KCNA10Q16322 511 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 DPF3Q92784 378 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 C8orf76Q96K31 380 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 MLXIPQ9HAP2 919 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 PKD2L1Q9P0L9 805 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 Q9Y3F1 56 aa17.7■□□□□ 0.42
TREX1-201ENST00000433541 GGPS1O95749 300 aa17.69■□□□□ 0.42
TREX1-201ENST00000433541 MYL3P08590 195 aa17.69■□□□□ 0.42
TREX1-201ENST00000433541 KRT2P35908 639 aa17.69■□□□□ 0.42
TREX1-201ENST00000433541 ATN1P54259 1190 aaPredicted RBP17.69■□□□□ 0.42
TREX1-201ENST00000433541 CHMP4BP1P59074 171 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms