RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 DDX41Q9UJV9 622 aaKnown RBP25.34■■□□□ 1.65
RPUSD3-206ENST00000433535 YBX2Q9Y2T7 364 aaKnown RBP25.34■■□□□ 1.65
RPUSD3-206ENST00000433535 MRVI1Q9Y6F6 885 aa25.34■■□□□ 1.65
RPUSD3-206ENST00000433535 ZBBXA8MT70 800 aa25.33■■□□□ 1.65
RPUSD3-206ENST00000433535 ANTXR2P58335 489 aa25.33■■□□□ 1.65
RPUSD3-206ENST00000433535 PDCD2LQ9BRP1 358 aa25.33■■□□□ 1.65
RPUSD3-206ENST00000433535 PRDM12Q9H4Q4 367 aa25.33■■□□□ 1.65
RPUSD3-206ENST00000433535 RIOX1Q9H6W3 641 aa25.33■■□□□ 1.65
RPUSD3-206ENST00000433535 CYTH3O43739 400 aa25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 EIF3JO75822 258 aaKnown RBP25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 MYCLP12524 364 aaPredicted RBP25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 RABGGTBP53611 331 aa25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 PTPN11Q06124 597 aaPredicted RBP25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 TROAPQ12815 778 aa25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 SART3Q15020 963 aaKnown RBP25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 TMEM67Q5HYA8 995 aa25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 USP38Q8NB14 1042 aa25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 IL31RAQ8NI17 732 aa25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 KAT2BQ92831 832 aa25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 NOD1Q9Y239 953 aa25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 RBM8AQ9Y5S9 174 aaKnown RBP25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 SLC4A7Q9Y6M7 1214 aa25.32■■□□□ 1.64
RPUSD3-206ENST00000433535 MB21D2Q8IYB1 491 aaPredicted RBP25.31■■□□□ 1.64
RPUSD3-206ENST00000433535 MAP4K1Q92918 833 aa25.31■■□□□ 1.64
RPUSD3-206ENST00000433535 A0A0C4DFX4 3053 aa25.31■■□□□ 1.64
RPUSD3-206ENST00000433535 MYH7BA7E2Y1 1941 aa25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 PITPNM1O00562 1244 aa25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 SORBS3O60504 671 aa25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 RGS20O76081 388 aa25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 PFKMP08237 780 aa25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 ZNF286BP0CG31 522 aa25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 PGM5Q15124 567 aa25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 PTGISQ16647 500 aa25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 PIBF1Q8WXW3 757 aa25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 ZFP91Q96JP5 570 aaPredicted RBP25.3■■□□□ 1.64
RPUSD3-206ENST00000433535 IQCF3P0C7M6 154 aa25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 MYOGP15173 224 aa25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 CASTP20810 708 aaKnown RBP25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 DGKDQ16760 1214 aa25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 GDF6Q6KF10 455 aaPredicted RBP25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 CATIPQ7Z7H3 387 aa25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 RETREG2Q8NC44 543 aa25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 EMID1Q96A84 441 aaPredicted RBP25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 CTAGE1Q96RT6 745 aa25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 GAS2L1Q99501 681 aaPredicted RBP25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 MYL10Q9BUA6 226 aa25.29■■□□□ 1.64
RPUSD3-206ENST00000433535 GCOM1H8Y6P7 765 aaPredicted RBP25.28■■□□□ 1.64
RPUSD3-206ENST00000433535 POLR2MP0CAP2 368 aa25.28■■□□□ 1.64
RPUSD3-206ENST00000433535 ATP2A2P16615 1042 aaKnown RBP25.28■■□□□ 1.64
RPUSD3-206ENST00000433535 BFSP2Q13515 415 aa25.28■■□□□ 1.64
RPUSD3-206ENST00000433535 FCHSD1Q86WN1 690 aa25.28■■□□□ 1.64
RPUSD3-206ENST00000433535 IGDCC4Q8TDY8 1250 aa25.28■■□□□ 1.64
RPUSD3-206ENST00000433535 SLC28A3Q9HAS3 691 aa25.28■■□□□ 1.64
RPUSD3-206ENST00000433535 MAP3K20Q9NYL2 800 aaKnown RBP25.28■■□□□ 1.64
RPUSD3-206ENST00000433535 MYO9BQ13459 2157 aa25.28■■□□□ 1.64
RPUSD3-206ENST00000433535 TRIP12Q14669 1992 aaPredicted RBP25.27■■□□□ 1.64
RPUSD3-206ENST00000433535 PNMA6FA0A0J9YX94 578 aa25.27■■□□□ 1.64
RPUSD3-206ENST00000433535 RFC2P35250 354 aa25.27■■□□□ 1.64
RPUSD3-206ENST00000433535 LAMC2Q13753 1193 aa25.27■■□□□ 1.64
RPUSD3-206ENST00000433535 SESTD1Q86VW0 696 aa25.27■■□□□ 1.64
RPUSD3-206ENST00000433535 DHX37Q8IY37 1157 aaKnown RBP25.27■■□□□ 1.64
RPUSD3-206ENST00000433535 PPTC7Q8NI37 304 aa25.27■■□□□ 1.64
RPUSD3-206ENST00000433535 ALG1Q9BT22 464 aa25.27■■□□□ 1.64
RPUSD3-206ENST00000433535 PSEN2P49810 448 aa25.26■■□□□ 1.63
RPUSD3-206ENST00000433535 COL9A3Q14050 684 aaPredicted RBP25.26■■□□□ 1.63
RPUSD3-206ENST00000433535 VSIG10LQ86VR7 867 aa25.26■■□□□ 1.63
RPUSD3-206ENST00000433535 ZNF654Q8IZM8 581 aa25.26■■□□□ 1.63
RPUSD3-206ENST00000433535 SAMD3Q8N6K7 520 aa25.26■■□□□ 1.63
RPUSD3-206ENST00000433535 TET1Q8NFU7 2136 aa25.26■■□□□ 1.63
RPUSD3-206ENST00000433535 GPKOWQ92917 476 aaPredicted RBP eCLIP25.26■■□□□ 1.63
RPUSD3-206ENST00000433535 FTOQ9C0B1 505 aaKnown RBP eCLIP25.26■■□□□ 1.63
RPUSD3-206ENST00000433535 LY9Q9HBG7 655 aa25.26■■□□□ 1.63
RPUSD3-206ENST00000433535 GGPS1O95749 300 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 F2P00734 622 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 ACTN1P12814 892 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 UBA1P22314 1058 aaKnown RBP25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 CCND2P30279 289 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 TRAF1Q13077 416 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 ADGRE1Q14246 886 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 MFSD10Q14728 455 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 PPP2R2DQ66LE6 453 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 PPM1EQ8WY54 764 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 DHX38Q92620 1227 aaKnown RBP25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 LSG1Q9H089 658 aaKnown RBP25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 HDAC6Q9UBN7 1215 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 GTF2IRD1Q9UHL9 959 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 PCDHA11Q9Y5I1 949 aa25.25■■□□□ 1.63
RPUSD3-206ENST00000433535 RBAK-RBAKDNI3L0D1 243 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 SP2Q02086 613 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 KIAA0753Q2KHM9 967 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 CELF3Q5SZQ8 465 aaKnown RBP25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 MYSM1Q5VVJ2 828 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 CCDC155Q8N6L0 562 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 C7orf31Q8N865 590 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 CAGE1Q8TC20 777 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 SPATA33Q96N06 139 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 KATNAL1Q9BW62 490 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 PRDM6Q9NQX0 595 aa25.24■■□□□ 1.63
RPUSD3-206ENST00000433535 PRUNE2Q8WUY3 3088 aa25.23■■□□□ 1.63
RPUSD3-206ENST00000433535 PRC1O43663 620 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms