RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 PRKG1Q13976 671 aa17■□□□□ 0.31
SF1-209ENST00000433274 KCNK18Q7Z418 384 aa17■□□□□ 0.31
SF1-209ENST00000433274 RPAP3Q9H6T3 665 aaPredicted RBP17■□□□□ 0.31
SF1-209ENST00000433274 CYP3A4P08684 503 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 TPD52L1Q16890 204 aaPredicted RBP16.99■□□□□ 0.31
SF1-209ENST00000433274 TMEM119Q4V9L6 283 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 LRRC8AQ8IWT6 810 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 NELFBQ8WX92 580 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 RAD54LQ92698 747 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 AS3MTQ9HBK9 375 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 SBF1O95248 1867 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 YBX3P16989 372 aaKnown RBP eCLIP16.99■□□□□ 0.312e-8■■■□□ 15.5
SF1-209ENST00000433274 BACE1P56817 501 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 PTPN21Q16825 1174 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 ZNF280CQ8ND82 737 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 CCDC47Q96A33 483 aaKnown RBP16.99■□□□□ 0.31
SF1-209ENST00000433274 WDR18Q9BV38 432 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 RAVER2Q9HCJ3 691 aaKnown RBP16.99■□□□□ 0.31
SF1-209ENST00000433274 EXOC1Q9NV70 894 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 RWDD2AQ9UIY3 292 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 PPP2R3BQ9Y5P8 575 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 ZHX2Q9Y6X8 837 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 DOCK1Q14185 1865 aa16.99■□□□□ 0.31
SF1-209ENST00000433274 TBX3O15119 743 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 MSH4O15457 936 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 PDE4DQ08499 809 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 TEX2Q8IWB9 1127 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 KIAA1524Q8TCG1 905 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 IMPACTQ9P2X3 320 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 MYMKA6NI61 221 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 DLK2Q6UY11 383 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 DYMQ7RTS9 669 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 ADSSL1Q8N142 457 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 GIMAP8Q8ND71 665 aaPredicted RBP16.98■□□□□ 0.31
SF1-209ENST00000433274 SLC38A10Q9HBR0 1119 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 HOMER2Q9NSB8 354 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 INTS13Q9NVM9 706 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.98■□□□□ 0.31
SF1-209ENST00000433274 PPP1R9AQ9ULJ8 1098 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 SSC5DA1L4H1 1573 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 KDM3AQ9Y4C1 1321 aa16.98■□□□□ 0.31
SF1-209ENST00000433274 NFIBO00712 420 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 ALAS1P13196 640 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 GSDMDP57764 484 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 SPIRE1Q08AE8 756 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 SUPT20HL1Q3ZLR7 823 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 NCAPH2Q6IBW4 605 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
SF1-209ENST00000433274 FAM20AQ96MK3 541 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 EHMT1Q9H9B1 1298 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 KIAA1024Q9UPX6 916 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 CTDP1Q9Y5B0 961 aaPredicted RBP16.97■□□□□ 0.31
SF1-209ENST00000433274 IGLV3-22A0A075B6J6 115 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 POTEB3A0JP26 581 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 POTECB2RU33 542 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 HMGCS2P54868 508 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
SF1-209ENST00000433274 CDKAL1Q5VV42 579 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 POTEBQ6S5H4 581 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 NT5C3AQ9H0P0 336 aa16.97■□□□□ 0.31
SF1-209ENST00000433274 ADARB2Q9NS39 739 aaKnown RBP16.97■□□□□ 0.31
SF1-209ENST00000433274 FCER1AP12319 257 aa16.96■□□□□ 0.31
SF1-209ENST00000433274 SEMA3FQ13275 785 aa16.96■□□□□ 0.31
SF1-209ENST00000433274 STIM1Q13586 685 aa16.96■□□□□ 0.31
SF1-209ENST00000433274 HYIQ5T013 277 aa16.96■□□□□ 0.31
SF1-209ENST00000433274 C9orf131Q5VYM1 1079 aa16.96■□□□□ 0.31
SF1-209ENST00000433274 VSTM4Q8IW00 320 aa16.96■□□□□ 0.31
SF1-209ENST00000433274 TRIM49BA6NDI0 452 aa16.96■□□□□ 0.3
SF1-209ENST00000433274 MED24O75448 989 aa16.96■□□□□ 0.3
SF1-209ENST00000433274 SSBP05455 408 aaKnown RBP eCLIP16.96■□□□□ 0.3
SF1-209ENST00000433274 STK4Q13043 487 aa16.96■□□□□ 0.3
SF1-209ENST00000433274 CLEC4DQ8WXI8 215 aa16.96■□□□□ 0.3
SF1-209ENST00000433274 HPS3Q969F9 1004 aa16.96■□□□□ 0.3
SF1-209ENST00000433274 E9PMD0 336 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 HSD17B4P51659 736 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 HAUS3Q68CZ6 603 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 DDX12PQ92771 950 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 ATG4CQ96DT6 458 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 PITPNM2Q9BZ72 1349 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 PSMA7O14818 248 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 ZBED4O75132 1171 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 IDEP14735 1019 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 PMS1P54277 932 aaKnown RBP16.95■□□□□ 0.3
SF1-209ENST00000433274 MUM1L1Q5H9M0 696 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 ARMCX5Q6P1M9 558 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 ERMNQ8TAM6 284 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 WNK4Q96J92 1243 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 LRRC27Q9C0I9 530 aa16.95■□□□□ 0.3
SF1-209ENST00000433274 POLR2AP24928 1970 aaKnown RBP16.94■□□□□ 0.3
SF1-209ENST00000433274 POTEFA5A3E0 1075 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 VWA5AO00534 786 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 CNNM4Q6P4Q7 775 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 POTEGQ6S5H5 508 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 POTEEQ6S8J3 1075 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 SLC30A10Q6XR72 485 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 UNC13DQ70J99 1090 aa16.94■□□□□ 0.3
SF1-209ENST00000433274 APTXQ7Z2E3 356 aaKnown RBP16.94■□□□□ 0.3
SF1-209ENST00000433274 CATSPER3Q86XQ3 398 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms