RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 PKN2Q16513 984 aaKnown RBP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 FILIP1LQ4L180 1135 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 TTMPQ5BVD1 217 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 TLDC1Q6P9B6 456 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 CCDC50Q8IVM0 306 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 KRI1Q8N9T8 703 aaKnown RBP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 RNF217Q8TC41 542 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 EPN3Q9H201 632 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 RABEP2Q9H5N1 569 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 GPHNQ9NQX3 736 aaPredicted RBP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 RNF186Q9NXI6 227 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 NDUFB9Q9Y6M9 179 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 SSC5DA1L4H1 1573 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 DOCK2Q92608 1830 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 MYH2Q9UKX2 1941 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 A0A1B0GUA9 196 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 CPLX1O14810 134 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 USP2O75604 605 aaPredicted RBP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 ZMYND10O75800 440 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 NEBLO76041 1014 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 ATP1A1P05023 1023 aaKnown RBP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 ITIH3Q06033 890 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 PDCLQ13371 301 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 PRAMEF18Q5VWM3 479 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 KANK3Q6NY19 840 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 CDC42EP5Q6NZY7 148 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 C6orf89Q6UWU4 347 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 KDM7AQ6ZMT4 941 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 ZNF572Q7Z3I7 529 aaPredicted RBP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 TEPSINQ96N21 525 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 CSRNP1Q96S65 589 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 SLF1Q9BQI6 1058 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 ACTR5Q9H9F9 607 aaPredicted RBP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 ATP6V0A4Q9HBG4 840 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 SLC40A1Q9NP59 571 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 HDAC6Q9UBN7 1215 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 DDX20Q9UHI6 824 aaKnown RBP8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 WDR19Q8NEZ3 1342 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 SYNRGQ9UMZ2 1314 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 GPR75-ASB3A0A0A6YYF3 556 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ANO9A1A5B4 782 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 PATL2C9JE40 543 aaKnown RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 CLSTN1O94985 981 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 NDUFA10O95299 355 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 LSP1P33241 339 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 BTDP43251 543 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 GRIK3Q13003 919 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 PRKG1Q13976 671 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ZKSCAN8Q15776 578 aaPredicted RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 SNCBQ16143 134 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 KRT40Q6A162 431 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 IQCEQ6IPM2 695 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 DLK2Q6UY11 383 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 SND1Q7KZF4 910 aaKnown RBP eCLIP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ERO1BQ86YB8 467 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 MB21D2Q8IYB1 491 aaPredicted RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 MMGT1Q8N4V1 131 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ZNF473Q8WTR7 871 aaKnown RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ARL8AQ96BM9 186 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 TMEM39BQ9GZU3 492 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 TAOK2Q9UL54 1235 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 GUCA1BQ9UMX6 200 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 EPN1Q9Y6I3 576 aaPredicted RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ANKRD33BA6NCL7 494 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 LRRC10BA6NIK2 292 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ENC1O14682 589 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ACTN4O43707 911 aaKnown RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 PTPREP23469 700 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 TNFRSF8P28908 595 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 EPHB4P54760 987 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 SLC8A3P57103 927 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 MECOMQ03112 1051 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 TBC1D8BQ0IIM8 1120 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 MAP3K12Q12852 859 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 NOL9Q5SY16 702 aaKnown RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 NAIF1Q69YI7 327 aaPredicted RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 TTC19Q6DKK2 380 aaPredicted RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 CCDC70Q6NSX1 233 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 EMBQ6PCB8 327 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 FAM228AQ86W67 206 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 STK11IPQ8N1F8 1099 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ZNF579Q8NAF0 562 aaKnown RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 EHBP1Q8NDI1 1231 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 CAVIN3Q969G5 261 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 JAKMIP2Q96AA8 810 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 DBNDD2Q9BQY9 259 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 ALG1Q9BT22 464 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 DHX36Q9H2U1 1008 aaKnown RBP8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 GINM1Q9NU53 330 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 TRIM10Q9UDY6 481 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 SERTAD1Q9UHV2 236 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 PCDHAC2Q9Y5I4 1007 aa8.54□□□□□ -1.04
CNKSR3-202ENST00000433165 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 SPDYE5A6NIY4 337 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 PDE2AO00408 941 aaPredicted RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 SH2B2O14492 632 aaPredicted RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 POLR2DO15514 142 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms