RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 ZNF713Q8N859 430 aaPredicted RBP18.51■□□□□ 0.55
CHFR-203ENST00000432561 ZNF622Q969S3 477 aaKnown RBP eCLIP18.51■□□□□ 0.559e-9■■□□□ 12.7
CHFR-203ENST00000432561 FUT8Q9BYC5 575 aa18.51■□□□□ 0.55
CHFR-203ENST00000432561 STK17AQ9UEE5 414 aa18.51■□□□□ 0.55
CHFR-203ENST00000432561 SMCHD1A6NHR9 2005 aa18.51■□□□□ 0.55
CHFR-203ENST00000432561 UTRNP46939 3433 aa18.51■□□□□ 0.55
CHFR-203ENST00000432561 MACROD2A1Z1Q3 448 aa18.51■□□□□ 0.55
CHFR-203ENST00000432561 E9PMD0 336 aa18.51■□□□□ 0.55
CHFR-203ENST00000432561 SMCR8Q8TEV9 937 aaPredicted RBP18.51■□□□□ 0.55
CHFR-203ENST00000432561 CAPZA3Q96KX2 299 aa18.51■□□□□ 0.55
CHFR-203ENST00000432561 KANSL2Q9H9L4 492 aa18.51■□□□□ 0.55
CHFR-203ENST00000432561 SWAP70Q9UH65 585 aa18.51■□□□□ 0.55
CHFR-203ENST00000432561 ZNF263O14978 683 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 EEF2P13639 858 aaKnown RBP18.5■□□□□ 0.55
CHFR-203ENST00000432561 STAT3P40763 770 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 ZBED6P86452 979 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 QRICH1Q2TAL8 776 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 KRT27Q7Z3Y8 459 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 JAKMIP2Q96AA8 810 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 RAB34Q9BZG1 259 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 MMRN2Q9H8L6 949 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 SCN9AQ15858 1988 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 CTAGE15A4D2H0 777 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 CTAGE8P0CG41 777 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 COL11A2P13942 1736 aaPredicted RBP18.5■□□□□ 0.55
CHFR-203ENST00000432561 FKBP15Q5T1M5 1219 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 CTAGE6Q86UF2 777 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 CTAGE4Q8IX94 777 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 NDST4Q9H3R1 872 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 HAUS4Q9H6D7 363 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 ZNHIT6Q9NWK9 470 aaKnown RBP18.5■□□□□ 0.55
CHFR-203ENST00000432561 PCDHA12Q9UN75 941 aa18.5■□□□□ 0.55
CHFR-203ENST00000432561 ERICH4A6NGS2 130 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 GDF11O95390 407 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 MMP10P09238 476 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 VSNL1P62760 191 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 PDIA5Q14554 519 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 TMEM119Q4V9L6 283 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 VWA3BQ502W6 1294 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 MYO1AQ9UBC5 1043 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 QSER1Q2KHR3 1735 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 NRXN2Q9P2S2 1712 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 SIPA1L1O43166 1804 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 POTEB3A0JP26 581 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 POTECB2RU33 542 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 NPR1P16066 1061 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 SLC1A4P43007 532 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 MRPL12P52815 198 aaKnown RBP18.49■□□□□ 0.55
CHFR-203ENST00000432561 GYS2P54840 703 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 ORC2Q13416 577 aaPredicted RBP18.49■□□□□ 0.55
CHFR-203ENST00000432561 PPP4R3AQ6IN85 833 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 POTEBQ6S5H4 581 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 C2CD5Q86YS7 1000 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 ERGIC2Q96RQ1 377 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 P2RX7Q99572 595 aaKnown RBP18.49■□□□□ 0.55
CHFR-203ENST00000432561 KIAA1024Q9UPX6 916 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 SUGT1Q9Y2Z0 365 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 PCDHA1Q9Y5I3 950 aa18.49■□□□□ 0.55
CHFR-203ENST00000432561 PVALEFA0A1B0GWK0 134 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 OAS2P29728 719 aaKnown RBP18.48■□□□□ 0.55
CHFR-203ENST00000432561 COASYQ13057 564 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 SEPT2Q15019 361 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 GPATCH4Q5T3I0 446 aaKnown RBP18.48■□□□□ 0.55
CHFR-203ENST00000432561 SH3BP5LQ7L8J4 393 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 NELFCDQ8IXH7 590 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 DNAJC19Q96DA6 116 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 SIK3Q9Y2K2 1263 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 GREB1LQ9C091 1923 aaPredicted RBP18.48■□□□□ 0.55
CHFR-203ENST00000432561 CCDC151A5D8V7 595 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 ZNF185O15231 689 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 CYLC1P35663 651 aaPredicted RBP18.48■□□□□ 0.55
CHFR-203ENST00000432561 SEMA3FQ13275 785 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 SMC1AQ14683 1233 aaKnown RBP18.48■□□□□ 0.55
CHFR-203ENST00000432561 HHIPL2Q6UWX4 724 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 LRRC55Q6ZSA7 311 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 TMC4Q7Z404 712 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 GUF1Q8N442 669 aaKnown RBP18.48■□□□□ 0.55
CHFR-203ENST00000432561 NUP58Q9BVL2 599 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 TANGO6Q9C0B7 1094 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 ABCB6Q9NP58 842 aa18.48■□□□□ 0.55
CHFR-203ENST00000432561 APBA1Q02410 837 aa18.47■□□□□ 0.55
CHFR-203ENST00000432561 CDC37Q16543 378 aaPredicted RBP18.47■□□□□ 0.55
CHFR-203ENST00000432561 WHAMMP3Q1A5X7 153 aa18.47■□□□□ 0.55
CHFR-203ENST00000432561 USH1GQ495M9 461 aa18.47■□□□□ 0.55
CHFR-203ENST00000432561 TRAPPC11Q7Z392 1133 aa18.47■□□□□ 0.55
CHFR-203ENST00000432561 MMS19Q96T76 1030 aa18.47■□□□□ 0.55
CHFR-203ENST00000432561 ARHGAP20Q9P2F6 1191 aa18.47■□□□□ 0.55
CHFR-203ENST00000432561 FAM198AQ9UFP1 575 aa18.47■□□□□ 0.55
CHFR-203ENST00000432561 PSMD14O00487 310 aa18.47■□□□□ 0.55
CHFR-203ENST00000432561 DRC1Q96MC2 740 aa18.47■□□□□ 0.55
CHFR-203ENST00000432561 KRT83P78385 493 aa18.46■□□□□ 0.55
CHFR-203ENST00000432561 EHHADHQ08426 723 aa18.46■□□□□ 0.55
CHFR-203ENST00000432561 CERKLQ49MI3 558 aaPredicted RBP18.46■□□□□ 0.55
CHFR-203ENST00000432561 SLFN13Q68D06 897 aa18.46■□□□□ 0.55
CHFR-203ENST00000432561 PPP1R18Q6NYC8 613 aa18.46■□□□□ 0.55
CHFR-203ENST00000432561 SIAH1Q8IUQ4 282 aa18.46■□□□□ 0.55
CHFR-203ENST00000432561 RETREG2Q8NC44 543 aa18.46■□□□□ 0.55
CHFR-203ENST00000432561 MTMR8Q96EF0 704 aa18.46■□□□□ 0.55
CHFR-203ENST00000432561 CCDC42Q96M95 316 aa18.46■□□□□ 0.55
CHFR-203ENST00000432561 HINFPQ9BQA5 517 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms