RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 PABPC4Q13310 644 aaKnown RBP eCLIP7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 PIN1Q13526 163 aaPredicted RBP7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 RASIP1Q5U651 963 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 LRRC69Q6ZNQ3 347 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 TTC30AQ86WT1 665 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 NINJ1Q92982 152 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 MTRQ99707 1265 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 SEZ6LQ9BYH1 1024 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 CUL9Q8IWT3 2517 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 FIBPO43427 364 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 ALDH1A1P00352 501 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 NEXNQ0ZGT2 675 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 PERM1Q5SV97 790 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 YOD1Q5VVQ6 348 aaPredicted RBP7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 SASS6Q6UVJ0 657 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 LSRQ86X29 649 aaPredicted RBP7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 KIAA1958Q8N8K9 716 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 KIFC2Q96AC6 838 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 SKA1Q96BD8 255 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 CHAMP1Q96JM3 812 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 SRCIN1Q9C0H9 1055 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 CAAP1Q9H8G2 361 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 CD248Q9HCU0 757 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 PCDHB5Q9Y5E4 795 aa7.12□□□□□ -1.27
NIPAL3-205ENST00000432012 TMEM238LA0A1B0GVL6 79 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 GIPC1O14908 333 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 ACPPP15309 386 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 MCM2P49736 904 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 SREBF2Q12772 1141 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 TRIM14Q14142 442 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 TNNI3KQ59H18 835 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 TMX3Q96JJ7 454 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 MYCBPQ99417 103 aaPredicted RBP7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 PRO3102Q9H379 93 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 ZNF180Q9UJW8 692 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 PLAAQ9Y263 795 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 NR2E3Q9Y5X4 410 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 KLRG2A4D1S0 409 aaPredicted RBP7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 METTL12A8MUP2 240 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 ADCY3O60266 1144 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 GNRH1P01148 92 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 CAPN2P17655 700 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 NEK4P51957 841 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 SKOR1P84550 965 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 ARHGEF6Q15052 776 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 AMOTQ4VCS5 1084 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 CCDC70Q6NSX1 233 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 NBPF11Q86T75 865 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 SLITRK4Q8IW52 837 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 RNF214Q8ND24 703 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 USP33Q8TEY7 942 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 OXCT2Q9BYC2 517 aaPredicted RBP7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 RHOBTB2Q9BYZ6 727 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 CHMP3Q9Y3E7 222 aa7.11□□□□□ -1.27
NIPAL3-205ENST00000432012 PTPRCP08575 1304 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 GSG1L2A8MUP6 293 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 CDK2AP1O14519 115 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 CYP19A1P11511 503 aaPredicted RBP7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 TM4SF4P48230 202 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 IDH3AP50213 366 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 HIRAP54198 1017 aaPredicted RBP7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 CLCQ05315 142 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 DCTN1Q14203 1278 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 PLEKHO1Q53GL0 409 aaPredicted RBP7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 CHCHD4Q8N4Q1 142 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 JARID2Q92833 1246 aaPredicted RBP7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 SYAP1Q96A49 352 aaPredicted RBP7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 MPP4Q96JB8 637 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 TMEM87BQ96K49 555 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 HTATIP2Q9BUP3 242 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 TSPY26PQ9H489 355 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 ABCB6Q9NP58 842 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 DDX20Q9UHI6 824 aaKnown RBP7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 NUB1Q9Y5A7 615 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 MRC1P22897 1456 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 FAM86C2PA6NEL3 165 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 ENC1O14682 589 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 GLULP15104 373 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 SARSP49591 514 aaKnown RBP7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 KIAA2012Q0VF49 1180 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 CUL4AQ13619 759 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 TNIP1Q15025 636 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 CCDC92Q53HC0 331 aaPredicted RBP7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 PPP1R26Q5T8A7 1209 aaPredicted RBP7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 CNNM4Q6P4Q7 775 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 ERO1AQ96HE7 468 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 MEIS3Q99687 375 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 BRMS1Q9HCU9 246 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 PCDHB10Q9UN67 800 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 HRH3Q9Y5N1 445 aa7.1□□□□□ -1.27
NIPAL3-205ENST00000432012 H7C1D1 291 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 HMMRO75330 724 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 EN2P19622 333 aaPredicted RBP7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 TDO2P48775 406 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 RRS1Q15050 365 aaKnown RBP7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 RASAL3Q86YV0 1011 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 SUPT20HQ8NEM7 779 aa7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 TRMT2BQ96GJ1 504 aaKnown RBP7.09□□□□□ -1.27
NIPAL3-205ENST00000432012 INTS4Q96HW7 963 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms