RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 RPL11P62913 178 aaKnown RBP4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 RBM10P98175 930 aaKnown RBP4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 AOC3Q16853 763 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 ODR4Q5SWX8 454 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 HLA-DQA1Q5Y7H0 255 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 WWC2Q6AWC2 1192 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 WAPLQ7Z5K2 1190 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 RIOX2Q8IUF8 465 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 ZC3H7AQ8IWR0 971 aaKnown RBP4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 ATL2Q8NHH9 583 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 PI4K2BQ8TCG2 481 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 PLEKHO2Q8TD55 490 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 BCL7CQ8WUZ0 217 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 FBXW5Q969U6 566 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 JMJD8Q96S16 334 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 TTC1Q99614 292 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 PDGFDQ9GZP0 370 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 PUS7LQ9H0K6 701 aaKnown RBP4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 SMURF1Q9HCE7 757 aa4.37□□□□□ -1.71
HMGB1P27-201ENST00000431429 SSU72P8A0A1W2PR75 194 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 NPHS1O60500 1241 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 EFEMP2O95967 443 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 AMY2AP04746 511 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 PYGMP11217 842 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 ATP2A2P16615 1042 aaKnown RBP4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 AMY2BP19961 511 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 SPINK2P20155 84 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 BCL6P41182 706 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 MCL1Q07820 350 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 LAPTM5Q13571 262 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 INAVAQ3KP66 663 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 HHIPL2Q6UWX4 724 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 RAVER1Q8IY67 606 aaKnown RBP4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 STK11IPQ8N1F8 1099 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 NXPE1Q8N323 547 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 SH3RF2Q8TEC5 729 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 ASIC4Q96FT7 647 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 BSDC1Q9NW68 430 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 SLC5A4Q9NY91 659 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 CHPF2Q9P2E5 772 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 FBLN5Q9UBX5 448 aa4.36□□□□□ -1.71
HMGB1P27-201ENST00000431429 WTIPA6NIX2 430 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 KIAA1324LA8MWY0 1029 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 MSTNO14793 375 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 TGM5O43548 720 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 MYO1BO43795 1136 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 KATNA1O75449 491 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 ALDH1L1O75891 902 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 FKBP9O95302 570 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 CD8BP10966 210 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 RPL10P27635 214 aaKnown RBP4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 SCNN1BP51168 640 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 ERVK-21P61565 698 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 TTF1Q15361 905 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 NR0B2Q15466 257 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 NFE2Q16621 373 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 ARHGAP44Q17R89 818 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 HSF5Q4G112 596 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 FAM47CQ5HY64 1035 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 EMC4Q5J8M3 183 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 PRSS36Q5K4E3 855 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 FSTL4Q6MZW2 842 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 FKBP9P1Q75LS8 142 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 OTOP3Q7RTS5 596 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 SPRED2Q7Z698 418 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 DTX1Q86Y01 620 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 NOSTRINQ8IVI9 506 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 CBARPQ8N350 705 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 NAT16Q8N8M0 369 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 PANK1Q8TE04 598 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 USP7Q93009 1102 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 MENTQ9BUN1 341 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 CARS2Q9HA77 564 aaKnown RBP4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 EMC7Q9NPA0 242 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 C19orf73Q9NVV2 129 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 ACSL6Q9UKU0 697 aa4.35□□□□□ -1.71
HMGB1P27-201ENST00000431429 FZD9O00144 591 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 DVL2O14641 736 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 GABRDO14764 452 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 GSTA4O15217 222 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 NRDCO43847 1150 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 PRKD3O94806 890 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 MED26O95402 600 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 IGHA1P01876 353 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 SRGAP2CP0DJJ0 459 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 PDE6AP16499 860 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 FPR2P25090 351 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 CD96P40200 585 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 CD97P48960 835 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 EPHB1P54762 984 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 BNIP3Q12983 259 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 DUSP4Q13115 394 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 FAM50AQ14320 339 aaKnown RBP4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 GPR19Q15760 415 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 RALGPS1Q5JS13 557 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 INTS5Q6P9B9 1019 aaKnown RBP4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 EFHBQ8N7U6 833 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 ANKS4BQ8N8V4 417 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms