RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ZNF76P36508 570 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 PDE4DQ08499 809 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 GOLGA8FQ08AF8 430 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 GOLGA8DPQ0D2H9 430 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 TMEM119Q4V9L6 283 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 DCAF15Q66K64 600 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 MCTP2Q6DN12 878 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 MOXD1Q6UVY6 613 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 SLC30A10Q6XR72 485 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 APOBEC3FQ8IUX4 373 aaKnown RBP18.69■□□□□ 0.58
USHBP1-203ENST00000431146 ADSSL1Q8N142 457 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 SLF1Q9BQI6 1058 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 EMILIN3Q9NT22 766 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 STK17AQ9UEE5 414 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 RWDD2AQ9UIY3 292 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 CCPG1Q9ULG6 757 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 MRPL11Q9Y3B7 192 aaKnown RBP18.69■□□□□ 0.58
USHBP1-203ENST00000431146 ZNF536O15090 1300 aa18.69■□□□□ 0.58
USHBP1-203ENST00000431146 OFD1O75665 1012 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 VCAM1P19320 739 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 PMS1P54277 932 aaKnown RBP18.68■□□□□ 0.58
USHBP1-203ENST00000431146 CCZ1BP86790 482 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 CCZ1P86791 482 aaPredicted RBP18.68■□□□□ 0.58
USHBP1-203ENST00000431146 AMPD3Q01432 767 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 Q4G0T1 1027 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 CDKAL1Q5VV42 579 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 VSTM4Q8IW00 320 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 HOOK2Q96ED9 719 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 EXOC1Q9NV70 894 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 POTEB3A0JP26 581 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 POTECB2RU33 542 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 FLOT1O75955 427 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 SKILP12757 684 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 GSDMDP57764 484 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 STK4Q13043 487 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 TRAF1Q13077 416 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 POTEBQ6S5H4 581 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 APTXQ7Z2E3 356 aaKnown RBP18.68■□□□□ 0.58
USHBP1-203ENST00000431146 CREBRFQ8IUR6 639 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 SLFN12Q8IYM2 578 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 PRPF38AQ8NAV1 312 aaKnown RBP18.68■□□□□ 0.58
USHBP1-203ENST00000431146 GIMAP8Q8ND71 665 aaPredicted RBP18.68■□□□□ 0.58
USHBP1-203ENST00000431146 LPAR1Q92633 364 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 HOMER2Q9NSB8 354 aa18.68■□□□□ 0.58
USHBP1-203ENST00000431146 MSH4O15457 936 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 SPIRE1Q08AE8 756 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 NCAPH2Q6IBW4 605 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 SCYL3Q8IZE3 742 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 RPAP3Q9H6T3 665 aaPredicted RBP18.67■□□□□ 0.58
USHBP1-203ENST00000431146 RAVER2Q9HCJ3 691 aaKnown RBP18.67■□□□□ 0.58
USHBP1-203ENST00000431146 KIAA1024Q9UPX6 916 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 E9PMD0 336 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 NFIBO00712 420 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 TEX33O43247 280 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 MED24O75448 989 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 ABCB11O95342 1321 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 ICAM1P05362 532 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 SSBP05455 408 aaKnown RBP eCLIP18.67■□□□□ 0.58
USHBP1-203ENST00000431146 SPTLC3Q9NUV7 552 aa18.67■□□□□ 0.58
USHBP1-203ENST00000431146 PTPRAP18433 802 aa18.66■□□□□ 0.58
USHBP1-203ENST00000431146 CIITAP33076 1130 aa18.66■□□□□ 0.58
USHBP1-203ENST00000431146 DNTTIP2Q5QJE6 756 aaKnown RBP18.66■□□□□ 0.58
USHBP1-203ENST00000431146 WDR18Q9BV38 432 aa18.66■□□□□ 0.58
USHBP1-203ENST00000431146 SLC39A2Q9NP94 309 aa18.66■□□□□ 0.58
USHBP1-203ENST00000431146 PICK1Q9NRD5 415 aa18.66■□□□□ 0.58
USHBP1-203ENST00000431146 RNF181Q9P0P0 153 aa18.66■□□□□ 0.58
USHBP1-203ENST00000431146 ZNF112Q9UJU3 913 aa18.66■□□□□ 0.58
USHBP1-203ENST00000431146 SSC5DA1L4H1 1573 aa18.66■□□□□ 0.58
USHBP1-203ENST00000431146 IGLV3-22A0A075B6J6 115 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 CYP3A4P08684 503 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 ALAS1P13196 640 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 IDEP14735 1019 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 DDX12PQ92771 950 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 EEF2KMTQ96G04 330 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 WNK4Q96J92 1243 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 ZHX2Q9Y6X8 837 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 A0A1B0GTH6 734 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 POTEFA5A3E0 1075 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 SFPQP23246 707 aaKnown RBP eCLIP18.65■□□□□ 0.58
USHBP1-203ENST00000431146 NR1I3Q14994 352 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 POTEGQ6S5H5 508 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 POTEEQ6S8J3 1075 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
USHBP1-203ENST00000431146 KIAA0895Q8NCT3 520 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 CCDC47Q96A33 483 aaKnown RBP18.65■□□□□ 0.58
USHBP1-203ENST00000431146 GINM1Q9NU53 330 aa18.65■□□□□ 0.58
USHBP1-203ENST00000431146 YBX3P16989 372 aaKnown RBP eCLIP18.64■□□□□ 0.57
USHBP1-203ENST00000431146 HMGCS2P54868 508 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 BACE1P56817 501 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 STIM1Q13586 685 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 MUM1L1Q5H9M0 696 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 CCDC150Q8NCX0 1101 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 SYT17Q9BSW7 474 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 COL20A1Q9P218 1284 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 KDM3AQ9Y4C1 1321 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 PHIPQ8WWQ0 1821 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 MEIS1O00470 390 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 PSMA7O14818 248 aa18.64■□□□□ 0.57
USHBP1-203ENST00000431146 TBX3O15119 743 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms