RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 PRDM10Q9NQV6 1147 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 CNPY2Q9Y2B0 182 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 ATP6V1DQ9Y5K8 247 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 ASTN1O14525 1302 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 ADCY3O60266 1144 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 CYP3A4P08684 503 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 DDIT3P35638 169 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 USP11P51784 963 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 RESTQ13127 1097 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 PKN2Q16513 984 aaKnown RBP12.52□□□□□ -0.41
CHD4-202ENST00000430771 LETM2Q2VYF4 491 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 MYSM1Q5VVJ2 828 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 NLRX1Q86UT6 975 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 IL31RAQ8NI17 732 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 CRYGNQ8WXF5 182 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 TRIB2Q92519 343 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.52□□□□□ -0.41
CHD4-202ENST00000430771 NRBP1Q9UHY1 535 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 PTPN22Q9Y2R2 807 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 PTCH2Q9Y6C5 1203 aa12.52□□□□□ -0.41
CHD4-202ENST00000430771 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
CHD4-202ENST00000430771 CIITAP33076 1130 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 PKP1Q13835 747 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 CCL14Q16627 93 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 CEP55Q53EZ4 464 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 EARS2Q5JPH6 523 aaKnown RBP12.51□□□□□ -0.41
CHD4-202ENST00000430771 TTC38Q5R3I4 469 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 VSIG10LQ86VR7 867 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 FBXO16Q8IX29 292 aaPredicted RBP12.51□□□□□ -0.41
CHD4-202ENST00000430771 GPRASP2Q96D09 838 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 CDHR1Q96JP9 859 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 ABHD16BQ9H3Z7 469 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 CHMP5Q9NZZ3 219 aa12.51□□□□□ -0.41
CHD4-202ENST00000430771 ZHX1Q9UKY1 873 aaPredicted RBP12.51□□□□□ -0.41
CHD4-202ENST00000430771 FIBPO43427 364 aa12.5□□□□□ -0.41
CHD4-202ENST00000430771 CCNT1O60563 726 aaKnown RBP12.5□□□□□ -0.41
CHD4-202ENST00000430771 BMP15O95972 392 aa12.5□□□□□ -0.41
CHD4-202ENST00000430771 GRK4P32298 578 aa12.5□□□□□ -0.41
CHD4-202ENST00000430771 FOXD4L5Q5VV16 416 aaPredicted RBP12.5□□□□□ -0.41
CHD4-202ENST00000430771 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
CHD4-202ENST00000430771 FBXO46Q6PJ61 603 aaPredicted RBP12.5□□□□□ -0.41
CHD4-202ENST00000430771 NIPA1Q7RTP0 329 aa12.5□□□□□ -0.41
CHD4-202ENST00000430771 FOXD4L4Q8WXT5 416 aaPredicted RBP12.5□□□□□ -0.41
CHD4-202ENST00000430771 ZNF396Q96N95 335 aaPredicted RBP12.5□□□□□ -0.41
CHD4-202ENST00000430771 INPP4AQ96PE3 977 aaPredicted RBP12.5□□□□□ -0.41
CHD4-202ENST00000430771 MXRA8Q9BRK3 442 aa12.5□□□□□ -0.41
CHD4-202ENST00000430771 FLRT1Q9NZU1 646 aa12.5□□□□□ -0.41
CHD4-202ENST00000430771 DDX25Q9UHL0 483 aaKnown RBP12.5□□□□□ -0.41
CHD4-202ENST00000430771 UBIAD1Q9Y5Z9 338 aa12.5□□□□□ -0.41
CHD4-202ENST00000430771 MAFGO15525 162 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 NEMFO60524 1076 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 TDP2O95551 362 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
CHD4-202ENST00000430771 ELNP15502 786 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 CYP2C19P33261 490 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 MRPS9P82933 396 aaKnown RBP12.49□□□□□ -0.41
CHD4-202ENST00000430771 MTMR1Q13613 665 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 TTLL4Q14679 1199 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 SLC9C1Q4G0N8 1177 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 Q4G0T1 1027 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 PPP4R3AQ6IN85 833 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 EEPD1Q7L9B9 569 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 PLA2G4DQ86XP0 818 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 SCFD2Q8WU76 684 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 MBOAT7Q96N66 472 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 JADE2Q9NQC1 790 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 TCEAL9Q9UHQ7 104 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 CEP131Q9UPN4 1083 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 MRVI1Q9Y6F6 885 aa12.49□□□□□ -0.41
CHD4-202ENST00000430771 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 CYP3A7-CYP3A51PA0A087WV96 503 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 FAM86B1E9PN63 330 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 IGHA2P01877 340 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 INHAP05111 366 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 CYBAP13498 195 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
CHD4-202ENST00000430771 AKR1A1P14550 325 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 ATP2B1P20020 1258 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 CYP3A7P24462 503 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 ICAM3P32942 547 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 ACVR2BQ13705 512 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 PRR16Q569H4 304 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 ATL3Q6DD88 541 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 KATNBL1Q9H079 304 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 RTEL1Q9NZ71 1219 aa12.48□□□□□ -0.41
CHD4-202ENST00000430771 IGLV3-22A0A075B6J6 115 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 MEIS1O00470 390 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 LAD1O00515 517 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 TBX3O15119 743 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHD4-202ENST00000430771 TGFB3P10600 412 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 ITGB5P18084 799 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 MCM7P33993 719 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 CALCRLQ16602 461 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
CHD4-202ENST00000430771 POTEDQ86YR6 584 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms