RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ATP1A3P13637 1013 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 KCNB1Q14721 858 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 NOL9Q5SY16 702 aaKnown RBP16.05■□□□□ 0.16
CALD1-207ENST00000430085 ETNPPLQ8TBG4 499 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 LRRC15Q8TF66 581 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 FAM20AQ96MK3 541 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 ZNF830Q96NB3 372 aaPredicted RBP16.05■□□□□ 0.16
CALD1-207ENST00000430085 PNMA5Q96PV4 448 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 UIMC1Q96RL1 719 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 XPO4Q9C0E2 1151 aaKnown RBP16.05■□□□□ 0.16
CALD1-207ENST00000430085 ZNF536O15090 1300 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 KDM3AQ9Y4C1 1321 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 SMCHD1A6NHR9 2005 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 PPP1R3GB7ZBB8 358 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 CBFA2T2O43439 604 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 FDX1P10109 184 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
CALD1-207ENST00000430085 CDK11BP21127 795 aaKnown RBP16.04■□□□□ 0.16
CALD1-207ENST00000430085 DHX8Q14562 1220 aaKnown RBP16.04■□□□□ 0.16
CALD1-207ENST00000430085 KMT5BQ4FZB7 885 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 CCDC186Q7Z3E2 898 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 MCF2L2Q86YR7 1114 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 LARP4BQ92615 738 aaKnown RBP16.04■□□□□ 0.16
CALD1-207ENST00000430085 C7orf25Q9BPX7 421 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 NT5C3AQ9H0P0 336 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 RAVER2Q9HCJ3 691 aaKnown RBP16.04■□□□□ 0.16
CALD1-207ENST00000430085 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
CALD1-207ENST00000430085 ALAS1P13196 640 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 PTGS1P23219 599 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
CALD1-207ENST00000430085 HMGCS2P54868 508 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 ASIC1P78348 528 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 TMEM119Q4V9L6 283 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.16
CALD1-207ENST00000430085 LENG9Q96B70 501 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 TRIM9Q9C026 710 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 LRRC27Q9C0I9 530 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 TMOD4Q9NZQ9 345 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 CTNND2Q9UQB3 1225 aa16.04■□□□□ 0.16
CALD1-207ENST00000430085 SLC26A4O43511 780 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 STX17P56962 302 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 UBASH3AP57075 661 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 SPATA1Q5VX52 437 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 HAUS3Q68CZ6 603 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 DLK2Q6UY11 383 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 ERMNQ8TAM6 284 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 RAD54LQ92698 747 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 C12orf42Q96LP6 360 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 NUDT12Q9BQG2 462 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 BLOC1S4Q9NUP1 217 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 EXOC1Q9NV70 894 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 NRBP1Q9UHY1 535 aa16.03■□□□□ 0.16
CALD1-207ENST00000430085 ADM5C9JUS6 153 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 MSH4O15457 936 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 KLRC4O43908 158 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 PPP1R12BO60237 982 aaPredicted RBP16.02■□□□□ 0.16
CALD1-207ENST00000430085 USP2O75604 605 aaPredicted RBP16.02■□□□□ 0.16
CALD1-207ENST00000430085 TOMM70O94826 608 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 RHOBTB3O94955 611 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 HSD17B4P51659 736 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 PAK1Q13153 545 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 STIM1Q13586 685 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 MCM6Q14566 821 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 TPD52L1Q16890 204 aaPredicted RBP16.02■□□□□ 0.16
CALD1-207ENST00000430085 GTPBP4Q9BZE4 634 aaKnown RBP16.02■□□□□ 0.16
CALD1-207ENST00000430085 HOMER2Q9NSB8 354 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 RABGAP1Q9Y3P9 1069 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
CALD1-207ENST00000430085 VWA5AO00534 786 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 NFIBO00712 420 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 CLCN1P35523 988 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 HSP90AA4PQ58FG1 418 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 HYIQ5T013 277 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 KRT26Q7Z3Y9 468 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 CYP2W1Q8TAV3 490 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 CLEC4DQ8WXI8 215 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 RWDD2AQ9UIY3 292 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 GDAQ9Y2T3 454 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 CSADQ9Y600 493 aa16.02■□□□□ 0.15
CALD1-207ENST00000430085 PHIPQ8WWQ0 1821 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 ZNF18P17022 549 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 STAT3P40763 770 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 UBXN2AP68543 259 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 MAP3K9P80192 1104 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 NCAPH2Q6IBW4 605 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 FILIP1Q7Z7B0 1213 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 NELFBQ8WX92 580 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 ATG4CQ96DT6 458 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 MED15Q96RN5 788 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.01■□□□□ 0.15
CALD1-207ENST00000430085 AFG3L2Q9Y4W6 797 aa16.01■□□□□ 0.15
CALD1-207ENST00000430085 IGLV3-22A0A075B6J6 115 aa16■□□□□ 0.15
CALD1-207ENST00000430085 PRCPP42785 496 aa16■□□□□ 0.15
CALD1-207ENST00000430085 PDE4DQ08499 809 aa16■□□□□ 0.15
CALD1-207ENST00000430085 VGLL4Q14135 290 aa16■□□□□ 0.15
CALD1-207ENST00000430085 CCDC144BQ3MJ40 725 aa16■□□□□ 0.15
CALD1-207ENST00000430085 SAMD3Q8N6K7 520 aa16■□□□□ 0.15
CALD1-207ENST00000430085 GIMAP8Q8ND71 665 aaPredicted RBP16■□□□□ 0.15
CALD1-207ENST00000430085 RBM46Q8TBY0 533 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms