RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 OGDHLQ9ULD0 1010 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 SMC3Q9UQE7 1217 aa17.09■□□□□ 0.33
GARNL3-204ENST00000429629 CIITAP33076 1130 aa17.08■□□□□ 0.32
GARNL3-204ENST00000429629 SAFBQ15424 915 aaKnown RBP eCLIP17.08■□□□□ 0.32
GARNL3-204ENST00000429629 DUSP28Q4G0W2 176 aa17.08■□□□□ 0.32
GARNL3-204ENST00000429629 KRT40Q6A162 431 aa17.08■□□□□ 0.32
GARNL3-204ENST00000429629 CCDC62Q6P9F0 684 aa17.08■□□□□ 0.32
GARNL3-204ENST00000429629 NIPA1Q7RTP0 329 aa17.08■□□□□ 0.32
GARNL3-204ENST00000429629 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
GARNL3-204ENST00000429629 GPRASP2Q96D09 838 aa17.08■□□□□ 0.32
GARNL3-204ENST00000429629 ZHX1Q9UKY1 873 aaPredicted RBP17.08■□□□□ 0.32
GARNL3-204ENST00000429629 KCNJ14Q9UNX9 436 aa17.08■□□□□ 0.32
GARNL3-204ENST00000429629 UBIAD1Q9Y5Z9 338 aa17.08■□□□□ 0.32
GARNL3-204ENST00000429629 RGS20O76081 388 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 RARBP10826 455 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 PDCP20941 246 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 CNGA1P29973 690 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 KRT2P35908 639 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 ARHGAP4P98171 946 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 TNFAIP2Q03169 654 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 TTLL4Q14679 1199 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 JAKMIP3Q5VZ66 844 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 NLRX1Q86UT6 975 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 U2AF1L4Q8WU68 220 aaKnown RBP17.07■□□□□ 0.32
GARNL3-204ENST00000429629 DEFB118Q96PH6 123 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 WDR11Q9BZH6 1224 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 FOXP1Q9H334 677 aaPredicted RBP17.07■□□□□ 0.32
GARNL3-204ENST00000429629 TMEM260Q9NX78 707 aa17.07■□□□□ 0.32
GARNL3-204ENST00000429629 GNEQ9Y223 722 aaKnown RBP17.07■□□□□ 0.32
GARNL3-204ENST00000429629 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 CYP3A7-CYP3A51PA0A087WV96 503 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 SPATA31C2B4DYI2 1134 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 MEIS1O00470 390 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 MYCLP12524 364 aaPredicted RBP17.06■□□□□ 0.32
GARNL3-204ENST00000429629 CYP3A7P24462 503 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 GJB2P29033 226 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 CEP55Q53EZ4 464 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 MOXD1Q6UVY6 613 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 FBXO16Q8IX29 292 aaPredicted RBP17.06■□□□□ 0.32
GARNL3-204ENST00000429629 ARRDC4Q8NCT1 418 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 IL31RAQ8NI17 732 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 TNFRSF25Q93038 417 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 MXRA8Q9BRK3 442 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 JADE2Q9NQC1 790 aa17.06■□□□□ 0.32
GARNL3-204ENST00000429629 ADAMTS3O15072 1205 aa17.05■□□□□ 0.32
GARNL3-204ENST00000429629 FIBPO43427 364 aa17.05■□□□□ 0.32
GARNL3-204ENST00000429629 ADCYAP1R1P41586 468 aa17.05■□□□□ 0.32
GARNL3-204ENST00000429629 GJA9P57773 515 aa17.05■□□□□ 0.32
GARNL3-204ENST00000429629 NONOQ15233 471 aaKnown RBP eCLIP17.05■□□□□ 0.32
GARNL3-204ENST00000429629 EEPD1Q7L9B9 569 aa17.05■□□□□ 0.32
GARNL3-204ENST00000429629 DIS3L2Q8IYB7 885 aaKnown RBP17.05■□□□□ 0.32
GARNL3-204ENST00000429629 GIMAP8Q8ND71 665 aaPredicted RBP17.05■□□□□ 0.32
GARNL3-204ENST00000429629 EMID1Q96A84 441 aaPredicted RBP17.05■□□□□ 0.32
GARNL3-204ENST00000429629 NAP1L4Q99733 375 aaKnown RBP17.05■□□□□ 0.32
GARNL3-204ENST00000429629 UPF3AQ9H1J1 476 aaKnown RBP17.05■□□□□ 0.32
GARNL3-204ENST00000429629 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
GARNL3-204ENST00000429629 PDGFCQ9NRA1 345 aa17.05■□□□□ 0.32
GARNL3-204ENST00000429629 GJB4Q9NTQ9 266 aa17.05■□□□□ 0.32
GARNL3-204ENST00000429629 DDX41Q9UJV9 622 aaKnown RBP17.05■□□□□ 0.32
GARNL3-204ENST00000429629 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
GARNL3-204ENST00000429629 TXNP10599 105 aaKnown RBP17.04■□□□□ 0.32
GARNL3-204ENST00000429629 SMPD1P17405 629 aa17.04■□□□□ 0.32
GARNL3-204ENST00000429629 ITGB5P18084 799 aa17.04■□□□□ 0.32
GARNL3-204ENST00000429629 CST5P28325 142 aaPredicted RBP17.04■□□□□ 0.32
GARNL3-204ENST00000429629 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
GARNL3-204ENST00000429629 TSEN34Q9BSV6 310 aaKnown RBP17.04■□□□□ 0.32
GARNL3-204ENST00000429629 DDX49Q9Y6V7 483 aaKnown RBP17.04■□□□□ 0.32
GARNL3-204ENST00000429629 BTBD18B2RXH4 712 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 TFRCP02786 760 aaKnown RBP17.03■□□□□ 0.32
GARNL3-204ENST00000429629 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.32
GARNL3-204ENST00000429629 NEDD9Q14511 834 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 PPP4R3AQ6IN85 833 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 KLHDC9Q8NEP7 349 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 RASGRP4Q8TDF6 673 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 TBCKQ8TEA7 893 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 MBOAT7Q96N66 472 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 XPNPEP3Q9NQH7 507 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 MRVI1Q9Y6F6 885 aa17.03■□□□□ 0.32
GARNL3-204ENST00000429629 ZNFX1Q9P2E3 1918 aaKnown RBP17.03■□□□□ 0.32
GARNL3-204ENST00000429629 CCDC85CA6NKD9 419 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 EDIL3O43854 480 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 DTNBO60941 627 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 GCFC2P16383 781 aaKnown RBP17.02■□□□□ 0.32
GARNL3-204ENST00000429629 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.32
GARNL3-204ENST00000429629 MTMR1Q13613 665 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 LAMC2Q13753 1193 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 BECN1Q14457 450 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 Q4G0T1 1027 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 RNF180Q86T96 592 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 AP5M1Q9H0R1 490 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 RTEL1Q9NZ71 1219 aa17.02■□□□□ 0.32
GARNL3-204ENST00000429629 CENPFP49454 3210 aa17.02■□□□□ 0.31
GARNL3-204ENST00000429629 IGLV3-22A0A075B6J6 115 aa17.01■□□□□ 0.31
GARNL3-204ENST00000429629 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms