RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ESYT1Q9BSJ8 1104 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 DBNDD1Q9H9R9 158 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 PLSCR2Q9NRY7 297 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 PANK4Q9NVE7 773 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 UTP6Q9NYH9 597 aaKnown RBP6.22□□□□□ -1.41
HERC4-206ENST00000427635 MYO3BQ8WXR4 1341 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 A1BGP04217 495 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 VDRP11473 427 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 PMLP29590 882 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 STAT2P52630 851 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 STX1BP61266 288 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 DMTNQ08495 405 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 NFX1Q12986 1120 aaKnown RBP6.22□□□□□ -1.41
HERC4-206ENST00000427635 SNX32Q86XE0 403 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 FAM178BQ8IXR5 827 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SRRM1Q8IYB3 904 aaKnown RBP6.22□□□□□ -1.41
HERC4-206ENST00000427635 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.22□□□□□ -1.41
HERC4-206ENST00000427635 WDR48Q8TAF3 677 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 PARD3Q8TEW0 1356 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 FAM149B1Q96BN6 582 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 TSSK1BQ9BXA7 367 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 ZNF804BA4D1E1 1349 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SYNRGQ9UMZ2 1314 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 UBXN8O00124 270 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 THAP12O43422 761 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 TNFAIP2Q03169 654 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 CCDC15Q0P6D6 951 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 CDC26Q8NHZ8 85 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SRRTQ9BXP5 876 aaKnown RBP6.22□□□□□ -1.41
HERC4-206ENST00000427635 TMCC3Q9ULS5 477 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 ZNF532Q9HCE3 1301 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 TNPO2O14787 897 aaKnown RBP6.22□□□□□ -1.41
HERC4-206ENST00000427635 DNAJC6O75061 913 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 RAD51Q06609 339 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SLC12A1Q13621 1099 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SYCP2LQ5T4T6 812 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 MEI1Q5TIA1 1274 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 CATSPER4Q7RTX7 472 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SH3TC2Q8TF17 1288 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 GLMNQ92990 594 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 IQCDQ96DY2 449 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 LSM14BQ9BX40 385 aaKnown RBP6.22□□□□□ -1.41
HERC4-206ENST00000427635 STN1Q9H668 368 aaKnown RBP6.22□□□□□ -1.41
HERC4-206ENST00000427635 BABAM1Q9NWV8 329 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SELENONQ9NZV5 590 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 FBXO40Q9UH90 709 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 TSKSQ9UJT2 592 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 RAB23Q9ULC3 237 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SUFUQ9UMX1 484 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 ZKSCAN5Q9Y2L8 839 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 PHEXP78562 749 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 KLHL30Q0D2K2 578 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 EEPD1Q7L9B9 569 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 ANKRD23Q86SG2 305 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 ARHGEF2Q92974 986 aaKnown RBP6.22□□□□□ -1.41
HERC4-206ENST00000427635 IFT43Q96FT9 208 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 PPP1R16BQ96T49 567 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 MEIS3Q99687 375 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 AAASQ9NRG9 546 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 ATG3Q9NT62 314 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 HOXC10Q9NYD6 342 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 MAP3K15Q6ZN16 1313 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 PRDM1O75626 825 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 ZBTB7AO95365 584 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 XRCC5P13010 732 aaKnown RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 MFAP3P55082 362 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 SEPT2Q15019 361 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 HP1BP3Q5SSJ5 553 aaPredicted RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 GALNT17Q6IS24 598 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 ZNF594Q96JF6 807 aaPredicted RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 ARFGAP3Q9NP61 516 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 CALCOCO1Q9P1Z2 691 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 HACL1Q9UJ83 578 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 PCDHA12Q9UN75 941 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 TIAM1Q13009 1591 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 GNGT2O14610 69 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 ZNF263O14978 683 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 MAP3K13O43283 966 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 EVI5O60447 810 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 PAMP19021 973 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 DBN1Q16643 649 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 ARHGAP15Q53QZ3 475 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.21□□□□□ -1.41
HERC4-206ENST00000427635 ENOX1Q8TC92 643 aaKnown RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 DDX17Q92841 729 aaKnown RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 DDX27Q96GQ7 796 aaKnown RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 FAM49AQ9H0Q0 323 aaPredicted RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 DHX36Q9H2U1 1008 aaKnown RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 MFSD1Q9H3U5 465 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 RABL2AQ9UBK7 228 aaPredicted RBP6.21□□□□□ -1.41
HERC4-206ENST00000427635 AMFRQ9UKV5 643 aa6.21□□□□□ -1.41
HERC4-206ENST00000427635 ATP10AO60312 1499 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 ZW10O43264 779 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 MARK3P27448 753 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 RBM6P78332 1123 aaKnown RBP6.21□□□□□ -1.42
HERC4-206ENST00000427635 DCLK2Q8N568 766 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 CCNYQ8ND76 341 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 SEPT8Q92599 483 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 ACCSQ96QU6 501 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms